RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 NUDT17P0C025 328 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 HTRA4P83105 476 aaPredicted RBP20.78■□□□□ 0.92
TRIO-223ENST00000515710 DENND2CQ68D51 928 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 GIPC2Q8TF65 315 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 EPB41L4BQ9H329 900 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.78■□□□□ 0.92
TRIO-223ENST00000515710 GJB5O95377 273 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 ZDHHC11BP0C7U3 371 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 ATF6P18850 670 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 PDK1Q15118 436 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 TERF2Q15554 542 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 B4GALNT4Q76KP1 1039 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 CPT1BQ92523 772 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 BADQ92934 168 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 ZBTB9Q96C00 473 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 SLC39A13Q96H72 371 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 FERMT1Q9BQL6 677 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 UBE2OQ9C0C9 1292 aaKnown RBP20.77■□□□□ 0.92
TRIO-223ENST00000515710 MFHAS1Q9Y4C4 1052 aa20.77■□□□□ 0.92
TRIO-223ENST00000515710 KCNU1A8MYU2 1149 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 PPP1R12AO14974 1030 aaPredicted RBP20.76■□□□□ 0.91
TRIO-223ENST00000515710 RIPK2O43353 540 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 MFSD11O43934 449 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 GCATO75600 419 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 MAP3K6O95382 1288 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 RAB33AQ14088 237 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 RASIP1Q5U651 963 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 VPS52Q8N1B4 723 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 FIBCD1Q8N539 461 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 NAT8LQ8N9F0 302 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 OVCA2Q8WZ82 227 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 PRCCQ92733 491 aaPredicted RBP20.76■□□□□ 0.91
TRIO-223ENST00000515710 PHACTR1Q9C0D0 580 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 CDC42EP4Q9H3Q1 356 aaKnown RBP20.76■□□□□ 0.91
TRIO-223ENST00000515710 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.76■□□□□ 0.91
TRIO-223ENST00000515710 NUDT5Q9UKK9 219 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 MAFFQ9ULX9 164 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 MYO16Q9Y6X6 1858 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 C5orf60A6NFR6 353 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 NCAM2O15394 837 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 MSI1O43347 362 aaKnown RBP20.76■□□□□ 0.91
TRIO-223ENST00000515710 RNF40O75150 1001 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 LRIG2O94898 1065 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 TBX4P57082 545 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 CREMQ03060 361 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 CEP85LQ5SZL2 805 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 HEATR6Q6AI08 1181 aaKnown RBP20.76■□□□□ 0.91
TRIO-223ENST00000515710 ZNF276Q8N554 614 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 PDZD8Q8NEN9 1154 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 CDK5RAP1Q96SZ6 601 aaKnown RBP20.76■□□□□ 0.91
TRIO-223ENST00000515710 MRPL17Q9NRX2 175 aaKnown RBP20.76■□□□□ 0.91
TRIO-223ENST00000515710 FNIP2Q9P278 1114 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 SSX2IPQ9Y2D8 614 aa20.76■□□□□ 0.91
TRIO-223ENST00000515710 GOLGA6L10A6NI86 522 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 PAGE1O75459 146 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 EPHB2P29323 1055 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 SERPINB6P35237 376 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 NRG1Q02297 640 aaPredicted RBP20.75■□□□□ 0.91
TRIO-223ENST00000515710 IFFO1Q0D2I5 559 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 SLC29A2Q14542 456 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 HTR3CQ8WXA8 447 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 C1orf74Q96LT6 269 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 RBM15Q96T37 977 aaKnown RBP eCLIP20.75■□□□□ 0.91
TRIO-223ENST00000515710 BRD8Q9H0E9 1235 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 SLC12A6Q9UHW9 1150 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 INSL6Q9Y581 213 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 SNX10Q9Y5X0 201 aa20.75■□□□□ 0.91
TRIO-223ENST00000515710 POLR3GO15318 223 aaPredicted RBP20.74■□□□□ 0.91
TRIO-223ENST00000515710 SEC24AO95486 1093 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 CSH1P0DML2 217 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 CSH2P0DML3 217 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 BASP1P80723 227 aaKnown RBP20.74■□□□□ 0.91
TRIO-223ENST00000515710 TRIP4Q15650 581 aaPredicted RBP20.74■□□□□ 0.91
TRIO-223ENST00000515710 PSRC1Q6PGN9 363 aaPredicted RBP20.74■□□□□ 0.91
TRIO-223ENST00000515710 CROCCP2Q86T23 111 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 ZBED2Q9BTP6 218 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 SIK2Q9H0K1 926 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 MAGED2Q9UNF1 606 aaPredicted RBP20.74■□□□□ 0.91
TRIO-223ENST00000515710 CHADO15335 359 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 TTC4O95801 387 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 MX2P20592 715 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 HOXC13P31276 330 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 ALDH1A3P47895 512 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 ZNF844Q08AG5 666 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 EFEMP1Q12805 493 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 MTA1Q13330 715 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 PRKD1Q15139 912 aaPredicted RBP20.74■□□□□ 0.91
TRIO-223ENST00000515710 TMEM240Q5SV17 173 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 ACBD5Q5T8D3 534 aaPredicted RBP20.74■□□□□ 0.91
TRIO-223ENST00000515710 SNX30Q5VWJ9 437 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 CENPUQ71F23 418 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 OR2W6PQ8NHA6 318 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 FCRL2Q96LA5 508 aaPredicted RBP20.74■□□□□ 0.91
TRIO-223ENST00000515710 PWWP2AQ96N64 755 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 CYP4F11Q9HBI6 524 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 TMBIM4Q9HC24 238 aa20.74■□□□□ 0.91
TRIO-223ENST00000515710 EIF3HO15372 352 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRIO-223ENST00000515710 FGF10O15520 208 aaPredicted RBP20.73■□□□□ 0.91
TRIO-223ENST00000515710 FGF18O76093 207 aa20.73■□□□□ 0.91
TRIO-223ENST00000515710 STK10O94804 968 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms