RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 TRIM14Q14142 442 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 C2orf27AQ580R0 203 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 MS4A13Q5J8X5 152 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 C10orf76Q5T2E6 689 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 PKN3Q6P5Z2 889 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 SYT13Q7L8C5 426 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
COPB2-212ENST00000514508 HJURPQ8NCD3 748 aaPredicted RBP12.86□□□□□ -0.35
COPB2-212ENST00000514508 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 SLC8A2Q9UPR5 921 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 SIGLEC16A6NMB1 481 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 SERPING1P05155 500 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 SKILP12757 684 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 TDGF1P13385 188 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 HOXA6P31267 233 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 SDC4P31431 198 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 CASP14P31944 242 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 KIR2DL1P43626 348 aaPredicted RBP12.85□□□□□ -0.35
COPB2-212ENST00000514508 NRLP54845 237 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 DEUP1Q05D60 604 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 TDRD12Q587J7 1177 aaKnown RBP12.85□□□□□ -0.35
COPB2-212ENST00000514508 BRMS1LQ5PSV4 323 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 OTUD1Q5VV17 481 aaPredicted RBP12.85□□□□□ -0.35
COPB2-212ENST00000514508 HGSNATQ68CP4 663 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 RNF43Q68DV7 783 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 ZC3H14Q6PJT7 736 aaKnown RBP12.85□□□□□ -0.35
COPB2-212ENST00000514508 TSSK4Q6SA08 328 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 SARM1Q6SZW1 724 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 TRMT11Q7Z4G4 463 aaKnown RBP12.85□□□□□ -0.35
COPB2-212ENST00000514508 ANKS1BQ7Z6G8 1248 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 PHLDB2Q86SQ0 1253 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 CHSY1Q86X52 802 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 VSTM4Q8IW00 320 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 MCOLN2Q8IZK6 566 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 CAMKK1Q8N5S9 505 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 EMC1Q8N766 993 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 OLIG1Q8TAK6 271 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 NELL1Q92832 810 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 TBCBQ99426 244 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 WDCPQ9H6R7 721 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 ZSCAN32Q9NX65 697 aa12.85□□□□□ -0.35
COPB2-212ENST00000514508 XPO7Q9UIA9 1087 aaKnown RBP12.85□□□□□ -0.35
COPB2-212ENST00000514508 C2CD4BA6NLJ0 364 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 PRRT4C9JH25 899 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 F5H5T6 163 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 K7ESF4 209 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 DDX3XO00571 662 aaKnown RBP eCLIP12.84□□□□□ -0.352e-11■■□□□ 12.7
COPB2-212ENST00000514508 TBL1XO60907 577 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 ENDOD1O94919 500 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 TPM1P09493 284 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 PDGFRAP16234 1089 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 TFE3P19532 575 aaPredicted RBP12.84□□□□□ -0.35
COPB2-212ENST00000514508 TACR2P21452 398 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 RDXP35241 583 aaKnown RBP12.84□□□□□ -0.35
COPB2-212ENST00000514508 TIE1P35590 1138 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 NBL1P41271 181 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 PTPN9P43378 593 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 DMC1Q14565 340 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 EIF4HQ15056 248 aaKnown RBP12.84□□□□□ -0.35
COPB2-212ENST00000514508 E2F5Q15329 346 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 EOGTQ5NDL2 527 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 ACBD5Q5T8D3 534 aaPredicted RBP12.84□□□□□ -0.35
COPB2-212ENST00000514508 EMC10Q5UCC4 262 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 RAP1GAP2Q684P5 730 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 TRNP1Q6NT89 227 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 DNAJC24Q6P3W2 148 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 BNIPLQ7Z465 357 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 CCDC117Q8IWD4 279 aaPredicted RBP12.84□□□□□ -0.35
COPB2-212ENST00000514508 SFTPA1Q8IWL2 248 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 DRC7Q8IY82 874 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 LGI2Q8N0V4 545 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 ALLCQ8N6M5 410 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 ZNF513Q8N8E2 541 aaPredicted RBP12.84□□□□□ -0.35
COPB2-212ENST00000514508 IL17RCQ8NAC3 791 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 JOSD2Q8TAC2 188 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 UCMAQ8WVF2 138 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 RXFP2Q8WXD0 754 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 FAM122AQ96E09 287 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 PRICKLE1Q96MT3 831 aaPredicted RBP12.84□□□□□ -0.35
COPB2-212ENST00000514508 PRMT1Q99873 361 aaKnown RBP12.84□□□□□ -0.35
COPB2-212ENST00000514508 ADAM33Q9BZ11 813 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 TKTL2Q9H0I9 626 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 FAM86C1Q9NVL1 165 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 C2orf42Q9NWW7 574 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 ARHGEF38Q9NXL2 777 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 TAS2R14Q9NYV8 317 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 CALCOCO1Q9P1Z2 691 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 CLEC4EQ9ULY5 219 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 MMP17Q9ULZ9 603 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 PCDHGA2Q9Y5H1 932 aa12.84□□□□□ -0.35
COPB2-212ENST00000514508 WDFY4Q6ZS81 3184 aa12.83□□□□□ -0.35
COPB2-212ENST00000514508 TCRBV5S1A1TA0A578 114 aa12.83□□□□□ -0.36
COPB2-212ENST00000514508 ANKRD62A6NC57 917 aa12.83□□□□□ -0.36
COPB2-212ENST00000514508 ANTXRLA6NF34 631 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms