RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SORCS3Q9UPU3 1222 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TNFSF13BQ9Y275 285 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 DLGAP1O14490 977 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 ALDH1A2O94788 518 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CHRNA1P02708 482 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 MCF2P10911 925 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TCF4P15884 667 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CD97P48960 835 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 MYBPC1Q00872 1141 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 PDE1BQ01064 536 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 OGDHQ02218 1023 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 GAD2Q05329 585 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CBX2Q14781 532 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 RCN1Q15293 331 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 FAM102BQ5T8I3 360 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 LMBRD2Q68DH5 695 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 ZCCHC8Q6NZY4 707 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TTC7BQ86TV6 843 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 LMNTD2Q8IXW0 634 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 ZBED8Q8IZ13 594 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 NSL1Q96IY1 281 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 BIRC8Q96P09 236 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SELENOSQ9BQE4 189 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 HAPLN2Q9GZV7 340 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CENPHQ9H3R5 247 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 STN1Q9H668 368 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 S100A14Q9HCY8 104 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 ACP6Q9NPH0 428 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 DLGAP2Q9P1A6 1054 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TMCC3Q9ULS5 477 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 NLRC5Q86WI3 1866 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 UTRNP46939 3433 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 hCG_1818297A0A087WSY0 165 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 ARHGEF37A1IGU5 675 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 LRRD1A4D1F6 860 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 PRSS47A8MTI9 375 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 E9PBE3 544 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 ZBTB39O15060 712 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 XPOTO43592 962 aaKnown RBP7.65□□□□□ -1.18
CLIP1-205ENST00000514271 VNN1O95497 513 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 RB1P06400 928 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 CFHP08603 1231 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 RBP3P10745 1247 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 PROZP22891 400 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 NOMO3P69849 1222 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 IL9RQ01113 521 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 CUL3Q13618 768 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 ARTNQ5T4W7 220 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 CATSPER4Q7RTX7 472 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 BBS5Q8N3I7 341 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 OXNAD1Q96HP4 312 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-205ENST00000514271 ACCSQ96QU6 501 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 PLVAPQ9BX97 442 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 MSRAQ9UJ68 235 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 SARDHQ9UL12 918 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 GIT1Q9Y2X7 761 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 DERAQ9Y315 318 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 PRSS51A0A1B0GVH4 220 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 RASA4BC9J798 803 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 RASA4O43374 803 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 ITGA2BP08514 1039 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 UQCRBP14927 111 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 GARTP22102 1010 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 PCSK6P29122 969 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 SLC5A2P31639 672 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 CYP2C18P33260 490 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 CLCN3P51790 818 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 MYL7Q01449 175 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 MBTD1Q05BQ5 628 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 CAPSQ13938 189 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 TRMT5Q32P41 509 aaKnown RBP7.65□□□□□ -1.18
CLIP1-205ENST00000514271 STEAP4Q687X5 459 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 PDE12Q6L8Q7 609 aaKnown RBP7.65□□□□□ -1.18
CLIP1-205ENST00000514271 SLC27A1Q6PCB7 646 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 RHPN2Q8IUC4 686 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 MAP4K3Q8IVH8 894 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 ULK2Q8IYT8 1036 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 WDTC1Q8N5D0 677 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 PAF1Q8N7H5 531 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 TMEM102Q8N9M5 508 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-205ENST00000514271 SMYD1Q8NB12 490 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 BBOF1Q8ND07 529 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 RBM15BQ8NDT2 890 aaKnown RBP7.65□□□□□ -1.18
CLIP1-205ENST00000514271 ATG4AQ8WYN0 398 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 PPP2R3CQ969Q6 453 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 TMEM175Q9BSA9 504 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 FRMD8P1Q9BZ68 369 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-205ENST00000514271 FAM49AQ9H0Q0 323 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-205ENST00000514271 MTO1Q9Y2Z2 717 aaKnown RBP7.65□□□□□ -1.18
CLIP1-205ENST00000514271 PLXNA4Q9HCM2 1894 aa7.65□□□□□ -1.18
CLIP1-205ENST00000514271 NYNRINQ9P2P1 1898 aaKnown RBP7.65□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM191CA6NGB0 347 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF701M0R085 212 aaPredicted RBP7.65□□□□□ -1.19
CLIP1-205ENST00000514271 DNAJA2O60884 412 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 NBNO60934 754 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 PRKCBP05771 671 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM191BP0C7N4 346 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 ADRA1DP25100 572 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 PRDX6P30041 224 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms