RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 RASGEF1CQ8N431 466 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 CENPTQ96BT3 561 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 ERLEC1Q96DZ1 483 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 ZNF184Q99676 751 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 C17orf80Q9BSJ5 609 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 ULBP1Q9BZM6 244 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 GRIP2Q9C0E4 1043 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 CDT1Q9H211 546 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 DDX28Q9NUL7 540 aaKnown RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 NCKIPSDQ9NZQ3 722 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SCHIP1Q9P0W5 487 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 PDP2Q9P2J9 529 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 PHLPP1O60346 1717 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 ATRNO75882 1429 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SIGLEC16A6NMB1 481 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 STX7O15400 261 aaKnown RBP13.37□□□□□ -0.27
PRDM16-208ENST00000514189 RECQL4O94761 1208 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 LCA5LO95447 670 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 CTBP1Q13363 440 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 MAP1SQ66K74 1059 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-208ENST00000514189 GAD1Q99259 594 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-208ENST00000514189 BRD8Q9H0E9 1235 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 PDGFCQ9NRA1 345 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 FAM50BQ9Y247 325 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 RPTORQ8N122 1335 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 YDJCA8MPS7 323 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 IRF6O14896 467 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 RABGGTBP53611 331 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 MARSP56192 900 aaKnown RBP13.37□□□□□ -0.27
PRDM16-208ENST00000514189 TXNRD3NBQ6F5E7 133 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 TMC7Q7Z402 723 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 EIF1ADQ8N9N8 165 aaKnown RBP13.37□□□□□ -0.27
PRDM16-208ENST00000514189 GLIS1Q8NBF1 620 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 NDNQ99608 321 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 ASPSCR1Q9BZE9 553 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 ROGDIQ9GZN7 287 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 SENP6Q9GZR1 1112 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-208ENST00000514189 SMPD4Q9NXE4 827 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 GRHL1Q9NZI5 618 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 BRWD1Q9NSI6 2320 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 CNTNAP2Q9UHC6 1331 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 SHOX2O60902 331 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-208ENST00000514189 GUCA1CO95843 209 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 HNRNPLP14866 589 aaKnown RBP eCLIP13.37□□□□□ -0.273e-12■■■□□ 15.3
PRDM16-208ENST00000514189 BDNFP23560 247 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 GRK2P25098 689 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 BEX3Q00994 111 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 BST2Q10589 180 aaKnown RBP13.37□□□□□ -0.27
PRDM16-208ENST00000514189 KRT33BQ14525 404 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 BMT2Q1RMZ1 405 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 FBXO48Q5FWF7 155 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 PPM1JQ5JR12 505 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 HYIQ5T013 277 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 AGAP9Q5VTM2 703 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 GLB1LQ6UWU2 654 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 ZPBP2Q6X784 338 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 TAGAPQ8N103 731 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 DAW1Q8N136 415 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 RNF157Q96PX1 679 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 NMRAL1Q9HBL8 299 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 LMCD1Q9NZU5 365 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 DSEQ9UL01 958 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 UBDO15205 165 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 ALBP02768 609 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 CHRNB2P17787 502 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 SLC6A3Q01959 620 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 STARD13Q9Y3M8 1113 aa13.37□□□□□ -0.27
PRDM16-208ENST00000514189 IGLV3-22A0A075B6J6 115 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 TMEM191CA6NGB0 347 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 ATP6V1B2P21281 511 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 CDH13P55290 713 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 HUNKP57058 714 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 NEDD8Q15843 81 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 FNBP1LQ5T0N5 605 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 SH3PXD2AQ5TCZ1 1133 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 DCAF12L1Q5VU92 463 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 LPCAT4Q643R3 524 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 CATSPER1Q8NEC5 780 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 TSPAN17Q96FV3 270 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 CATSPERBQ9H7T0 1116 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 ZNF395Q9H8N7 513 aaPredicted RBP13.36□□□□□ -0.27
PRDM16-208ENST00000514189 H0Y626 953 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 ANXA9O76027 345 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 TRIM16O95361 564 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 MMP8P22894 467 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 FOXN2P32314 431 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 HDAC4P56524 1084 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 RNF220Q5VTB9 566 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 CLNKQ7Z7G1 428 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 AMIGO2Q86SJ2 522 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 PIGZQ86VD9 579 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 SNX31Q8N9S9 440 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 MPP4Q96JB8 637 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 NAT9Q9BTE0 207 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 BTBD7Q9P203 1132 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 BTNL10A8MVZ5 291 aa13.36□□□□□ -0.27
PRDM16-208ENST00000514189 ADSSP30520 456 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms