RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 MAN1B1Q9UKM7 699 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 RALYQ9UKM9 306 aaKnown RBP12.73□□□□□ -0.37
SNHG4-208ENST00000514110 KLK13Q9UKR3 277 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 ZMIZ1Q9ULJ6 1067 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 A0A1B0GTW7 788 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 GOLGA6L7A0A1B0GV03 622 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 METTL12A8MUP2 240 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 M0QYV0 167 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 PSMA7O14818 248 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 PMM2O15305 246 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 SH3BP5O60239 455 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 LATS1O95835 1130 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 ACADMP11310 421 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 BRD2P25440 801 aaKnown RBP12.72□□□□□ -0.37
SNHG4-208ENST00000514110 OXTRP30559 389 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 SLC6A4P31645 630 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 ARID5AQ03989 594 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 SLC14A1Q13336 389 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 E2F5Q15329 346 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 CNGA2Q16280 664 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 PTPRNQ16849 979 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 CCDC40Q4G0X9 1142 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 FNDC3BQ53EP0 1204 aaKnown RBP12.72□□□□□ -0.37
SNHG4-208ENST00000514110 RFWD3Q6PCD5 774 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 KIAA0907Q7Z7F0 614 aaPredicted RBP12.72□□□□□ -0.37
SNHG4-208ENST00000514110 FAM124AQ86V42 546 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 PPM1KQ8N3J5 372 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNHG4-208ENST00000514110 OR2T3Q8NH03 318 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 DHTKD1Q96HY7 919 aaPredicted RBP12.72□□□□□ -0.37
SNHG4-208ENST00000514110 CEP63Q96MT8 703 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 NUP58Q9BVL2 599 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 GTPBP4Q9BZE4 634 aaKnown RBP12.72□□□□□ -0.37
SNHG4-208ENST00000514110 MIR1-1HGQ9H1L0 117 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 TMEM245Q9H330 911 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 GGA2Q9UJY4 613 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNHG4-208ENST00000514110 NFE2L3Q9Y4A8 694 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 NEUROG3Q9Y4Z2 214 aa12.72□□□□□ -0.37
SNHG4-208ENST00000514110 PCNX2A6NKB5 2137 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 IGLV3-27P01718 113 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 LTFP02788 710 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 PABPC1P11940 636 aaKnown RBP12.71□□□□□ -0.37
SNHG4-208ENST00000514110 BMP6P22004 513 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 CD70P32970 193 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 ZNF445P59923 1031 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 BNC1Q01954 994 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 STIM1Q13586 685 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 FAM133BQ5BKY9 247 aaKnown RBP12.71□□□□□ -0.37
SNHG4-208ENST00000514110 PIK3R6Q5UE93 754 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 MBLAC2Q68D91 279 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 TTI2Q6NXR4 508 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 RRAGAQ7L523 313 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 ARHGEF19Q8IW93 802 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 CHCHD4Q8N4Q1 142 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 C1orf216Q8TAB5 229 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 WFIKKN2Q8TEU8 576 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 IRGQQ8WZA9 623 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 IL21RQ9HBE5 538 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 EIF2B4Q9UI10 523 aaKnown RBP12.71□□□□□ -0.37
SNHG4-208ENST00000514110 HOOK1Q9UJC3 728 aaKnown RBP12.71□□□□□ -0.37
SNHG4-208ENST00000514110 PLA2G4CQ9UP65 541 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 SLCO1B1Q9Y6L6 691 aa12.71□□□□□ -0.37
SNHG4-208ENST00000514110 CACNA1EQ15878 2313 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 PPP1R3GB7ZBB8 358 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 H0Y626 953 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 BCAT2O15382 392 aaPredicted RBP12.7□□□□□ -0.38
SNHG4-208ENST00000514110 ACSL4O60488 711 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 TBL1XO60907 577 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 TRIM16O95361 564 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 FYNP06241 537 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 ACSL1P33121 698 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 TBX4P57082 545 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 TRIP6Q15654 476 aaKnown RBP12.7□□□□□ -0.38
SNHG4-208ENST00000514110 NADSYN1Q6IA69 706 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 RAB44Q7Z6P3 723 aaPredicted RBP12.7□□□□□ -0.38
SNHG4-208ENST00000514110 NAXDQ8IW45 347 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 UNC45BQ8IWX7 931 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 AHI1Q8N157 1196 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 NELFBQ8WX92 580 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 MYEOVQ96EZ4 313 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 HSFY1Q96LI6 401 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 ZDHHC5Q9C0B5 715 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 MIS12Q9H081 205 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 LHX5Q9H2C1 402 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 C6orf106Q9H6K1 298 aaPredicted RBP12.7□□□□□ -0.38
SNHG4-208ENST00000514110 PRSS16Q9NQE7 514 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 CTNND2Q9UQB3 1225 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 MSRB2Q9Y3D2 182 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 CHD6Q8TD26 2715 aa12.7□□□□□ -0.38
SNHG4-208ENST00000514110 P4HA2O15460 535 aa12.69□□□□□ -0.38
SNHG4-208ENST00000514110 DLDP09622 509 aaKnown RBP12.69□□□□□ -0.38
SNHG4-208ENST00000514110 C7P10643 843 aa12.69□□□□□ -0.38
SNHG4-208ENST00000514110 POLR2EP19388 210 aaKnown RBP12.69□□□□□ -0.38
SNHG4-208ENST00000514110 SLC11A2P49281 568 aa12.69□□□□□ -0.38
SNHG4-208ENST00000514110 RPS14P62263 151 aaKnown RBP12.69□□□□□ -0.38
SNHG4-208ENST00000514110 NUCB2P80303 420 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms