RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ANKARQ7Z5J8 1434 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 KTN1Q86UP2 1357 aaKnown RBP4.78□□□□□ -1.64
HTT-210ENST00000512909 KIAA0232Q92628 1395 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 TTC21BQ7Z4L5 1316 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 LINC00473A8K010 186 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 EXOC3O60645 756 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 GCATO75600 419 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 NTSR2O95665 410 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 ANXA6P08133 673 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 DHRS4L1P0CG22 281 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 HSD3B1P14060 373 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 TYRP1P17643 537 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 MAPK9P45984 424 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 AMPHP49418 695 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 SCAPQ12770 1279 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 PPFIA1Q13136 1202 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 TMEM196Q5HYL7 178 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 FNDC7Q5VTL7 733 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 ANKRD40Q6AI12 368 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 DEFB132Q7Z7B7 95 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 RASAL3Q86YV0 1011 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 CACNA2D3Q8IZS8 1091 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 KCNH5Q8NCM2 988 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 BEND2Q8NDZ0 799 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 SUN3Q8TAQ9 357 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 OVCA2Q8WZ82 227 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 DAZAP1Q96EP5 407 aaKnown RBP4.77□□□□□ -1.65
HTT-210ENST00000512909 TRAPPC9Q96Q05 1148 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 GDF15Q99988 308 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 ISCA1Q9BUE6 129 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 DUSP22Q9NRW4 184 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 SLC17A6Q9P2U8 582 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 GRHPRQ9UBQ7 328 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 TLK1Q9UKI8 766 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 PACSIN3Q9UKS6 424 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 DLC1Q96QB1 1528 aa4.77□□□□□ -1.65
HTT-210ENST00000512909 PXDNQ92626 1479 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 ZAR1LA6NP61 321 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 MATN3O15232 486 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 LARGE1O95461 756 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 ARP10275 920 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 PBX1P40424 430 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 TNNT2P45379 298 aaPredicted RBP4.76□□□□□ -1.65
HTT-210ENST00000512909 RENBPP51606 427 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 ARL4CP56559 192 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 FOXO1Q12778 655 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 POSTNQ15063 836 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 C4orf46Q504U0 113 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 CC2D1BQ5T0F9 858 aaKnown RBP4.76□□□□□ -1.65
HTT-210ENST00000512909 CDC42BPGQ6DT37 1551 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 CCDC144NLQ6NUI1 221 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 CEP85Q6P2H3 762 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 NAPRTQ6XQN6 538 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 MRGPRGQ86SM5 289 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 SLC44A2Q8IWA5 706 aaPredicted RBP4.76□□□□□ -1.65
HTT-210ENST00000512909 SFTPA1Q8IWL2 248 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 ULK2Q8IYT8 1036 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 TCP11L2Q8N4U5 519 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 NKAPQ8N5F7 415 aaKnown RBP4.76□□□□□ -1.65
HTT-210ENST00000512909 AFG1LQ8WV93 481 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 LINC00476Q8WZB0 136 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 TBC1D5Q92609 795 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 RFKQ969G6 155 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 EID2BQ96D98 161 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 COG3Q96JB2 828 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 CCDC17Q96LX7 622 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 PRR25Q96S07 402 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 TMEM120AQ9BXJ8 343 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 TP63Q9H3D4 680 aaPredicted RBP4.76□□□□□ -1.65
HTT-210ENST00000512909 TOR3AQ9H497 397 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 CPNE5Q9HCH3 593 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 SERTAD4Q9NUC0 356 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 SH3BP4Q9P0V3 963 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 VPS51Q9UID3 782 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 VPS4AQ9UN37 437 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 UBE2J1Q9Y385 318 aaPredicted RBP4.76□□□□□ -1.65
HTT-210ENST00000512909 DGKBQ9Y6T7 804 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 COL15A1P39059 1388 aa4.76□□□□□ -1.65
HTT-210ENST00000512909 BCL9LQ86UU0 1499 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 SPATA31A5Q5VU36 1347 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 SPATA31A7Q8IWB4 1347 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 ADGRB1O14514 1584 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3DA0A087WVF3 549 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3IA0A087WXS9 549 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3EA0A087X179 549 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3KA0A087X1G2 549 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3BA6NDS4 549 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3FA6NER0 549 aaPredicted RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3LB9A6J9 549 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 UBE2Q2LH0YL09 131 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 AGPSO00116 658 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 PIP5K1CO60331 668 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 PPP6R2O75170 966 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 KRT38O76015 456 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3HP0C7X1 549 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 GYS1P13807 737 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 GPD1P21695 349 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 PLA2G5P39877 138 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 MPLP40238 635 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms