RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 ADGRF2Q8IZF7 708 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 DCLK2Q8N568 766 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 CELF5Q8N6W0 485 aaKnown RBP7.34□□□□□ -1.23
RFC1-215ENST00000512881 MAB21L3Q8N8X9 362 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 SPATA18Q8TC71 538 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 BPIFB1Q8TDL5 484 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 LEO1Q8WVC0 666 aaPredicted RBP7.34□□□□□ -1.23
RFC1-215ENST00000512881 SCFD1Q8WVM8 642 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 MSANTD3Q96H12 275 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 CCDC74BQ96LY2 380 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 SLC38A3Q99624 504 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 IER2Q9BTL4 223 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 FAM126AQ9BYI3 521 aaPredicted RBP7.34□□□□□ -1.23
RFC1-215ENST00000512881 BLZF1Q9H2G9 400 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 MAGEF1Q9HAY2 307 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 SP110Q9HB58 689 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 AGPAT3Q9NRZ7 376 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 GKN1Q9NS71 199 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 GTSE1Q9NYZ3 720 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 ZMYM5Q9UJ78 669 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 RCOR1Q9UKL0 485 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 CFAP45Q9UL16 551 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 MAGED2Q9UNF1 606 aaPredicted RBP7.34□□□□□ -1.23
RFC1-215ENST00000512881 CCL26Q9Y258 94 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 DCHS1Q96JQ0 3298 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 CACNA1IQ9P0X4 2223 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 COL4A3Q01955 1670 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 PVALEFA0A1B0GWK0 134 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 SHISA3A0PJX4 238 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 GREM1O60565 184 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 ATP2C2O75185 946 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 NOL4O94818 638 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 PDGFRBP09619 1106 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 DLATP10515 647 aaKnown RBP7.33□□□□□ -1.24
RFC1-215ENST00000512881 TNNI1P19237 187 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 GNL1P36915 607 aaPredicted RBP7.33□□□□□ -1.24
RFC1-215ENST00000512881 AVPR1AP37288 418 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 ID4P47928 161 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 CXCL12P48061 93 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 CYP2J2P51589 502 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 CCR3P51677 355 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 HK2P52789 917 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 SATB1Q01826 763 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 EGR3Q06889 387 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 CYP24A1Q07973 514 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 CUL4BQ13620 913 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 PKP1Q13835 747 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 LRRC32Q14392 662 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 PPP2R5DQ14738 602 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 PSMD6Q15008 389 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 PON2Q15165 354 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 CCDC142Q17RM4 750 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 ITPRIPL2Q3MIP1 535 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 CFAP221Q4G0U5 840 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 DGKKQ5KSL6 1271 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 HS2ST1Q7LGA3 356 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 WDR49Q8IV35 697 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 SCN4BQ8IWT1 228 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 PHACTR4Q8IZ21 702 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 SPEM1Q8N4L4 309 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 XXYLT1Q8NBI6 393 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 STKLD1Q8NE28 680 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 ABHD4Q8TB40 342 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 KBTBD7Q8WVZ9 684 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 MRPS31Q92665 395 aaKnown RBP7.33□□□□□ -1.24
RFC1-215ENST00000512881 USP13Q92995 863 aaPredicted RBP7.33□□□□□ -1.24
RFC1-215ENST00000512881 CCDC127Q96BQ5 260 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 FUBP3Q96I24 572 aaKnown RBP eCLIP7.33□□□□□ -1.24
RFC1-215ENST00000512881 FNBP1Q96RU3 617 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 MMS19Q96T76 1030 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 EPC1Q9H2F5 836 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 SLC39A2Q9NP94 309 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 RBM12Q9NTZ6 932 aaKnown RBP7.33□□□□□ -1.24
RFC1-215ENST00000512881 TDP1Q9NUW8 608 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 MAGEC2Q9UBF1 373 aaPredicted RBP7.33□□□□□ -1.24
RFC1-215ENST00000512881 CDH9Q9ULB4 789 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 OTOGLQ3ZCN5 2332 aa7.33□□□□□ -1.24
RFC1-215ENST00000512881 UBE4BO95155 1302 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 DNAH14Q0VDD8 3507 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 TSPAN15O95858 294 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 FAM163BP0C2L3 166 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 ZGLP1P0C6A0 271 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 RAC2P15153 192 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 WARSP23381 471 aaKnown RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 BDNFP23560 247 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 EIF4A3P38919 411 aaKnown RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 MAGEA11P43364 429 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 PSMC1P62191 440 aaKnown RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 RUNX3Q13761 415 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 ZNF268Q14587 947 aaPredicted RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 MAPRE1Q15691 268 aaKnown RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 KNOP1Q1ED39 458 aaKnown RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 BMT2Q1RMZ1 405 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 TRIM68Q6AZZ1 485 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 CC2D1AQ6P1N0 951 aaPredicted RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 C4orf50Q6ZRC1 276 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 C12orf56Q8IXR9 622 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 GRAMD1CQ8IYS0 662 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 CEP57L1Q8IYX8 460 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 SYNPOQ8N3V7 929 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms