RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SPATA3Q8NHX4 192 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 TMEM174Q8WUU8 243 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 INPP5DQ92835 1189 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 ZNF479Q96JC4 524 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 ZNF347Q96SE7 839 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 SENP7Q9BQF6 1050 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 MAGEB5Q9BZ81 275 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 CDCP1Q9H5V8 836 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 IL21RQ9HBE5 538 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 PNPLA8Q9NP80 782 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 PAPOLBQ9NRJ5 636 aaKnown RBP2.65□□□□□ -1.99
PDGFC-208ENST00000512711 DECR2Q9NUI1 292 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 MYO1AQ9UBC5 1043 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 PROCRQ9UNN8 238 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 FAM50BQ9Y247 325 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 MAN2B2Q9Y2E5 1009 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 PCDHB7Q9Y5E2 793 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 SPATA31A5Q5VU36 1347 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 SPATA31A7Q8IWB4 1347 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 SHROOM4Q9ULL8 1493 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 A0A1W2PPC4 97 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 OR2W5A6NFC9 320 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 C4orf47A7E2U8 309 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 TTC34A8MYJ7 566 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 F8W810 466 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 M0QYT0 321 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 PRPF4O43172 522 aaKnown RBP eCLIP2.64□□□□□ -1.99
PDGFC-208ENST00000512711 TAF5LO75529 589 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 ATF3P18847 181 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 TFEBP19484 476 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 STT3AP46977 705 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 POLD2P49005 469 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 ALDH7A1P49419 539 aaKnown RBP2.64□□□□□ -1.99
PDGFC-208ENST00000512711 ATP1A4Q13733 1029 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 P3H1Q32P28 736 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.64□□□□□ -1.99
PDGFC-208ENST00000512711 LIPMQ5VYY2 423 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 MRNIPQ6NTE8 343 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 HIBCHQ6NVY1 386 aaPredicted RBP2.64□□□□□ -1.99
PDGFC-208ENST00000512711 MSANTD2Q6P1R3 559 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 ZNF474Q6S9Z5 364 aaPredicted RBP2.64□□□□□ -1.99
PDGFC-208ENST00000512711 FMNL3Q8IVF7 1028 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 EXD3Q8N9H8 876 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 OIT3Q8WWZ8 545 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 ASB12Q8WXK4 309 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 KAT2AQ92830 837 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 CTAGE1Q96RT6 745 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 NAA15Q9BXJ9 866 aaKnown RBP2.64□□□□□ -1.99
PDGFC-208ENST00000512711 ZCWPW1Q9H0M4 648 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 MYLK2Q9H1R3 596 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 MRPL44Q9H9J2 332 aaKnown RBP2.64□□□□□ -1.99
PDGFC-208ENST00000512711 PRDM11Q9NQV5 511 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 RXFP3Q9NSD7 469 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 WWOXQ9NZC7 414 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 ANAPC4Q9UJX5 808 aa2.64□□□□□ -1.99
PDGFC-208ENST00000512711 H0YGN5 161 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 APAF1O14727 1248 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 APOL1O14791 398 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 TNFRSF13BO14836 293 aaPredicted RBP2.63□□□□□ -1.99
PDGFC-208ENST00000512711 NCK2O43639 380 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 SYF2O95926 243 aaKnown RBP2.63□□□□□ -1.99
PDGFC-208ENST00000512711 NGFRP08138 427 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 SRGAP2BP0DMP2 458 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 HARSP12081 509 aaKnown RBP2.63□□□□□ -1.99
PDGFC-208ENST00000512711 MYL4P12829 197 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 AKR1A1P14550 325 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 MATN1P21941 496 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 MMP8P22894 467 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 GSTM5P46439 218 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 ARL13BQ3SXY8 428 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 ANXA2RQ3ZCQ2 193 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 HMBOX1Q6NT76 420 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 TLDC1Q6P9B6 456 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 LVRNQ6Q4G3 990 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 DGKHQ86XP1 1220 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 CCDC150Q8NCX0 1101 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 GLMPQ8WWB7 406 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 OVCA2Q8WZ82 227 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 NPIPB3Q92617 1050 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 KAT2BQ92831 832 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 GRAMD1AQ96CP6 724 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 THOC3Q96J01 351 aaKnown RBP2.63□□□□□ -1.99
PDGFC-208ENST00000512711 SNX27Q96L92 541 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 RNF26Q9BY78 433 aaPredicted RBP2.63□□□□□ -1.99
PDGFC-208ENST00000512711 SLCO5A1Q9H2Y9 848 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 EPS8L2Q9H6S3 715 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 SPAG4Q9NPE6 437 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.63□□□□□ -1.99
PDGFC-208ENST00000512711 RGL1Q9NZL6 768 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 LAMP3Q9UQV4 416 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 EMSYQ7Z589 1322 aa2.63□□□□□ -1.99
PDGFC-208ENST00000512711 FAM234BA2RU67 622 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 J3KTA2 159 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 NPC1O15118 1278 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 ZC3H11AO75152 810 aaKnown RBP eCLIP2.62□□□□□ -1.99
PDGFC-208ENST00000512711 PPP6R2O75170 966 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 CER1O95813 267 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 SLC3A2P08195 630 aaKnown RBP2.62□□□□□ -1.99
PDGFC-208ENST00000512711 EGR1P18146 543 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 SLC5A2P31639 672 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms