RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-216ENST00000512683 RING1Q06587 406 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 TMEM215Q68D42 235 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 FMNL3Q8IVF7 1028 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 AHI1Q8N157 1196 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 TATDN2Q93075 761 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 TSG101Q99816 390 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 DDX50Q9BQ39 737 aaKnown RBP13.11□□□□□ -0.31
VEGFA-216ENST00000512683 ULBP1Q9BZM6 244 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 BTBD1Q9H0C5 482 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 MIR1-1HGQ9H1L0 117 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 LHX5Q9H2C1 402 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 GAREM1Q9H706 876 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 SGK2Q9HBY8 427 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 METTL14Q9HCE5 456 aaKnown RBP13.11□□□□□ -0.31
VEGFA-216ENST00000512683 TM7SF3Q9NS93 570 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 DKK4Q9UBT3 224 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 TSPAN16Q9UKR8 245 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 ZFYVE26Q68DK2 2539 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 NUP205Q92621 2012 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 TRIM49BA6NDI0 452 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 DKK1O94907 266 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 SMC2O95347 1197 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 PAEPP09466 180 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 HLA-FP30511 346 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 SLC11A2P49281 568 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 CNGA2Q16280 664 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 HLA-BQ31612 363 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 MSANTD2Q6P1R3 559 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 LCLAT1Q6UWP7 414 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 BHLHA9Q7RTU4 235 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 TMPRSS7Q7RTY8 843 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 ELOA2Q8IYF1 753 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-216ENST00000512683 SIX6OS1Q8N1H7 587 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 ZCCHC9Q8N567 271 aaKnown RBP13.1□□□□□ -0.31
VEGFA-216ENST00000512683 OR2I1PQ8NGU4 316 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 SETD7Q8WTS6 366 aaKnown RBP13.1□□□□□ -0.31
VEGFA-216ENST00000512683 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 SKA1Q96BD8 255 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 HSFY1Q96LI6 401 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 CAMK1GQ96NX5 476 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 ARID3AQ99856 593 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 EIF2B4Q9UI10 523 aaKnown RBP13.1□□□□□ -0.31
VEGFA-216ENST00000512683 CLEC4EQ9ULY5 219 aa13.1□□□□□ -0.31
VEGFA-216ENST00000512683 E9PAM4 449 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 PCDHGA12O60330 932 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 TSPAN3O60637 253 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 FBXO21O94952 628 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 DNTTP04053 509 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 ASLP04424 464 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 CDK4P11802 303 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 PABPC1P11940 636 aaKnown RBP13.09□□□□□ -0.31
VEGFA-216ENST00000512683 CD44P16070 742 aaKnown RBP13.09□□□□□ -0.31
VEGFA-216ENST00000512683 PRKCHP24723 683 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 PPP1R2P41236 205 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 GRIA4P48058 902 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 LRRC63Q05C16 580 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 SCAPQ12770 1279 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 CETN1Q12798 172 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 ARID5BQ14865 1188 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 TTC31Q49AM3 519 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-216ENST00000512683 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 FNDC3BQ53EP0 1204 aaKnown RBP13.09□□□□□ -0.31
VEGFA-216ENST00000512683 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 SMYD5Q6GMV2 418 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 ISM2Q6H9L7 571 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 USP30Q70CQ3 517 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 BEND5Q7L4P6 421 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 ADIPOR2Q86V24 386 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 GALNT15Q8N3T1 639 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 BAHD1Q8TBE0 780 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-216ENST00000512683 RHBDD1Q8TEB9 315 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 SLC35F5Q8WV83 523 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 CCDC86Q9H6F5 360 aaKnown RBP13.09□□□□□ -0.31
VEGFA-216ENST00000512683 CD93Q9NPY3 652 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 ARMCX3Q9UH62 379 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-216ENST00000512683 HOOK1Q9UJC3 728 aaKnown RBP13.09□□□□□ -0.31
VEGFA-216ENST00000512683 LHX6Q9UPM6 363 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 NCKAP1Q9Y2A7 1128 aa13.09□□□□□ -0.31
VEGFA-216ENST00000512683 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-216ENST00000512683 FRYQ5TBA9 3013 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 PLXND1Q9Y4D7 1925 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 YJEFN3A6XGL0 299 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 E7ENQ6 273 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 TAF4O00268 1085 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 O00370 1275 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 P4HA2O15460 535 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 PAPSS1O43252 624 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-216ENST00000512683 RNASEH1O60930 286 aaKnown RBP13.08□□□□□ -0.32
VEGFA-216ENST00000512683 GADD45BO75293 160 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-216ENST00000512683 SEMA4FO95754 770 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 IGLV3-27P01718 113 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 CD19P15391 556 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 POLR2EP19388 210 aaKnown RBP13.08□□□□□ -0.32
VEGFA-216ENST00000512683 BMP6P22004 513 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 CD27P26842 260 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms