RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SLC14A1Q13336 389 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 HNRNPDQ14103 355 aaKnown RBP15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 MPP7Q5T2T1 576 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 NUGGCQ68CJ6 796 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 KLHL10Q6JEL2 608 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 AHI1Q8N157 1196 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 OR2I1PQ8NGU4 316 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 LMO3Q8TAP4 145 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 GOLGA1Q92805 767 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 KAT5Q92993 513 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 HSFY1Q96LI6 401 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 ZSWIM1Q9BR11 485 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 IRX2Q9BZI1 471 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 ZDHHC5Q9C0B5 715 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 TMEM245Q9H330 911 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 ABCB8Q9NUT2 735 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 GGA2Q9UJY4 613 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 PLA2G4CQ9UP65 541 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 SPAARA0A1B0GVQ0 90 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 RNF225M0QZC1 329 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 IRAK2O43187 625 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 GABBR2O75899 941 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 FBXO21O94952 628 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 TOP3BO95985 862 aaKnown RBP15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 LTFP02788 710 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 CD59P13987 128 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 BRD2P25440 801 aaKnown RBP15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 SLC11A2P49281 568 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 RING1Q06587 406 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 CAMK2GQ13555 558 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 FNDC3BQ53EP0 1204 aaKnown RBP15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 DCAF12L1Q5VU92 463 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 CHST9Q7L1S5 443 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 KIAA0907Q7Z7F0 614 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 CACUL1Q86Y37 369 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 UNC45BQ8IWX7 931 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 ZNF557Q8N988 423 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 OR2T3Q8NH03 318 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 NELFBQ8WX92 580 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 NUP58Q9BVL2 599 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 WDFY3Q8IZQ1 3526 aa15.31■□□□□ 0.04
CCHCR1-229ENST00000512418 METTL12A8MUP2 240 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 PPP1R3GB7ZBB8 358 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 PIK3R2O00459 728 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 GJB3O75712 270 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 GNA14O95837 355 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 ATP5BP06576 529 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 C7P10643 843 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 PABPC1P11940 636 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 HLA-EP13747 358 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 BMP6P22004 513 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 RDXP35241 583 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 SGSHP51688 502 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 GRIK2Q13002 908 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 FAM133BQ5BKY9 247 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 PIK3R6Q5UE93 754 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 RRAGAQ7L523 313 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 ADIPOR2Q86V24 386 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 TRIM59Q8IWR1 403 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 ZCCHC9Q8N567 271 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 CLEC4CQ8WTT0 213 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 CYB5D2Q8WUJ1 264 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 AZIN2Q96A70 460 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 TMEM121BQ9BXQ6 578 aaPredicted RBP15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 PCED1AQ9H1Q7 454 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 FBRSQ9HAH7 460 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 CTNND2Q9UQB3 1225 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 NEUROG3Q9Y4Z2 214 aa15.3■□□□□ 0.04
CCHCR1-229ENST00000512418 TMEM8BA6NDV4 472 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 H0Y626 953 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 BCAT2O15382 392 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 SART1O43290 800 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 HYAL3O43820 417 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 ACSL4O60488 711 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 TBL1XO60907 577 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 TRIM16O95361 564 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 DLDP09622 509 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 MARSP56192 900 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 TBX4P57082 545 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 KCNH2Q12809 1159 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 NNTQ13423 1086 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 MORC3Q14149 939 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 PTPRNQ16849 979 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 MBLAC2Q68D91 279 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 RFWD3Q6PCD5 774 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 ARHGEF19Q8IW93 802 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 KDF1Q8NAX2 398 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 EHBP1Q8NDI1 1231 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 GATA6Q92908 595 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 DDX50Q9BQ39 737 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 MIS12Q9H081 205 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 MIR1-1HGQ9H1L0 117 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 LHX5Q9H2C1 402 aa15.29■□□□□ 0.04
CCHCR1-229ENST00000512418 TYW5A2RUC4 315 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 CALCAP01258 141 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 AFPP02771 609 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 SLC6A4P31645 630 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 ZBTB16Q05516 673 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 PAK1Q13153 545 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms