RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 TBC1D30Q9Y2I9 924 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 SNX9Q9Y5X1 595 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PYCARD-AS1I3L0S3 204 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 IFIT3O14879 490 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 KCNQ3O43525 872 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 RECQL4O94761 1208 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PRPF6O94906 941 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 CST3P01034 146 aaPredicted RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 PBX3P40426 434 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 CCR10P46092 362 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 HADHBP55084 474 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 NME5P56597 212 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 YPEL5P62699 121 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 CAMK1Q14012 370 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 FRG1Q14331 258 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 NOMO1Q15155 1222 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 INAQ16352 499 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PROSER3Q2NL68 480 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 C15orf59Q2T9L4 293 aaPredicted RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 FILIP1LQ4L180 1135 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 C1orf185Q5T7R7 199 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 TTC22Q5TAA0 569 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 CRTC3Q6UUV7 619 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 ADGRF2Q8IZF7 708 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 MAML2Q8IZL2 1156 aaPredicted RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 SLC4A11Q8NBS3 891 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 HIPK4Q8NE63 616 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 OR6B3Q8NGW1 331 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 BCL7CQ8WUZ0 217 aaPredicted RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 MRPL38Q96DV4 380 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 ZDHHC12Q96GR4 267 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 CMTM3Q96MX0 182 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 TBC1D32Q96NH3 1257 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 SYT17Q9BSW7 474 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PUS3Q9BZE2 481 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHD1-208ENST00000512392 NELFAQ9H3P2 528 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 RPRD1BQ9NQG5 326 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 POLE3Q9NRF9 147 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 COX16Q9P0S2 106 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 SLCO3A1Q9UIG8 710 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 TSPYL4Q9UJ04 414 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 AGO2Q9UKV8 859 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 INTS6Q9UL03 887 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 KCNE2Q9Y6J6 123 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 MROH5Q6ZUA9 1318 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 MYO1GB0I1T2 1018 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 BTBD18B2RXH4 712 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 HNRNPCL2B2RXH8 293 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 HNRNPCL1O60812 293 aaKnown RBP6.52□□□□□ -1.37
CHD1-208ENST00000512392 ADAM23O75077 832 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 PRDM1O75626 825 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 ANXA6P08133 673 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 TPM1P09493 284 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 LTA4HP09960 611 aaKnown RBP6.52□□□□□ -1.37
CHD1-208ENST00000512392 CCR1P32246 355 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 RDXP35241 583 aaKnown RBP6.52□□□□□ -1.37
CHD1-208ENST00000512392 ADMP35318 185 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 BCL6P41182 706 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 MAGEA8P43361 318 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 EXOSC9Q06265 439 aaKnown RBP6.52□□□□□ -1.37
CHD1-208ENST00000512392 ARHGEF6Q15052 776 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 TRIM71Q2Q1W2 868 aaKnown RBP6.52□□□□□ -1.37
CHD1-208ENST00000512392 XKR9Q5GH70 373 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 ZNF484Q5JVG2 852 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 UTP14CQ5TAP6 766 aaKnown RBP6.52□□□□□ -1.37
CHD1-208ENST00000512392 KRT80Q6KB66 452 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 CHST9Q7L1S5 443 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 TMPRSS7Q7RTY8 843 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 DNAAF5Q86Y56 855 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 CCDC28AQ8IWP9 274 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 DNAJC10Q8IXB1 793 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 NIPA2Q8N8Q9 360 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 ZNF671Q8TAW3 534 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 SLC13A3Q8WWT9 602 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 MAP6Q96JE9 813 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 FAM167AQ96KS9 214 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 PRICKLE1Q96MT3 831 aaPredicted RBP6.52□□□□□ -1.37
CHD1-208ENST00000512392 MMP19Q99542 508 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 HERC2P3Q9BVR0 1158 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 ZNF552Q9H707 407 aaPredicted RBP6.52□□□□□ -1.37
CHD1-208ENST00000512392 CNNM1Q9NRU3 951 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 CDY2AQ9Y6F7 541 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 COL15A1P39059 1388 aa6.52□□□□□ -1.37
CHD1-208ENST00000512392 FRMD3A2A2Y4 597 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 FAM90A18PA6NE21 464 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 FAM90A16PA6NEW6 464 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 FAM90A9PA6NNJ1 464 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 CAPN14A8MX76 684 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 FAM90A5PA8MXJ8 464 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 L7N2F9 121 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 LRIG2O94898 1065 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 ONECUT2O95948 504 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 PLGP00747 810 aaPredicted RBP6.51□□□□□ -1.37
CHD1-208ENST00000512392 ALPPP05187 535 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 PFKMP08237 780 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 MMP2P08253 660 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 FAM90A15PP0C7V4 464 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 FAM90A14PP0C7W9 464 aa6.51□□□□□ -1.37
CHD1-208ENST00000512392 ALPPL2P10696 532 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms