RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 GAS8O95995 478 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 OR4Q2P0C623 313 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 ZDHHC11BP0C7U3 371 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 SRFP11831 508 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 NCAM1P13591 858 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 OR1D2P34982 312 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 COILP38432 576 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 PBX3P40426 434 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 ARL4AP40617 200 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 NR2C2P49116 596 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 CLCN4P51793 760 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 CDH6P55285 790 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 ATP11AP98196 1134 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 DR1Q01658 176 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 NRG1Q02297 640 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 RING1Q06587 406 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 DPYSL3Q14195 570 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 VEPH1Q14D04 833 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 EFHC2Q5JST6 749 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 ZFYVE27Q5T4F4 411 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 OTUD1Q5VV17 481 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 BTBD8Q5XKL5 378 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 C1orf228Q6PIY5 440 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 PRSS55Q6UWB4 352 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 MFSD7Q6UXD7 560 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 BZW1Q7L1Q6 419 aaKnown RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 TAS1R1Q7RTX1 841 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 MTERF4Q7Z6M4 381 aaKnown RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 SCN4BQ8IWT1 228 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 CCDC105Q8IYK2 499 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 ATAD1Q8NBU5 361 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 ATL2Q8NHH9 583 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 SLC22A17Q8WUG5 538 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 RAPGEF5Q92565 580 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 MAGOHBQ96A72 148 aaKnown RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 DCBLD2Q96PD2 775 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 KLHL5Q96PQ7 755 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 HAPLN3Q96S86 360 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 PEBP4Q96S96 227 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 KRT12Q99456 494 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 SNRNP25Q9BV90 132 aaKnown RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 PARD6BQ9BYG5 372 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 OSBPL6Q9BZF3 934 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 RETREG1Q9H6L5 497 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 ZWILCHQ9H900 591 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 KCNK12Q9HB15 430 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 PCDH18Q9HCL0 1135 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 EPS15L1Q9UBC2 864 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 FBXW11Q9UKB1 542 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 FZD10Q9ULW2 581 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 UTP11Q9Y3A2 253 aaKnown RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 SIT1Q9Y3P8 196 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 FAM170AA1A519 330 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 CFAP69A5D8W1 941 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 PRR23AA6NEV1 266 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 H3BRJ5 948 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 M0QYT0 321 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 PIK3R2O00459 728 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 HEXIM1O94992 359 aaKnown RBP9.43□□□□□ -0.9
NR1I3-228ENST00000511676 ECEL1O95672 775 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 ITGAVP06756 1048 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 POU2F2P09086 479 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 TCF4P15884 667 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 PFKLP17858 780 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 HOXA9P31269 272 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 L1CAMP32004 1257 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 ADRA1BP35368 520 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 NRLP54845 237 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 PRKCQQ04759 706 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 SEMA3BQ13214 749 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 XRCC4Q13426 336 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 KRT81Q14533 505 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 DDR2Q16832 855 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 CDO1Q16878 200 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 MGAT5BQ3V5L5 792 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 SYPL2Q5VXT5 272 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 SLC9A4Q6AI14 798 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 TXNRD3NBQ6F5E7 133 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 EMBQ6PCB8 327 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 CCDC137Q6PK04 289 aaKnown RBP9.43□□□□□ -0.9
NR1I3-228ENST00000511676 TMC5Q6UXY8 1006 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 C4orf22Q6V702 233 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 SCD5Q86SK9 330 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 ITIH5Q86UX2 942 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 DTWD2Q8NBA8 298 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 SCAMP5Q8TAC9 235 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 SLC35B2Q8TB61 432 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 SLC7A14Q8TBB6 771 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 DQX1Q8TE96 717 aaKnown RBP9.43□□□□□ -0.9
NR1I3-228ENST00000511676 RNF139Q8WU17 664 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 RNF157Q96PX1 679 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 IER2Q9BTL4 223 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 LRRC1Q9BTT6 524 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 APOL5Q9BWW9 433 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 AP1M1Q9BXS5 423 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 FAM126AQ9BYI3 521 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-228ENST00000511676 DCLK3Q9C098 648 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 DDX47Q9H0S4 455 aaKnown RBP9.43□□□□□ -0.9
NR1I3-228ENST00000511676 TSPYL1Q9H0U9 437 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms