RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 OTUD1Q5VV17 481 aaPredicted RBP16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 ETFBKMTQ8IXQ9 262 aa16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 DCLK2Q8N568 766 aa16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 VCPIP1Q96JH7 1222 aa16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 SELENOOQ9BVL4 669 aa16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 PACSIN1Q9BY11 444 aa16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 ADAM33Q9BZ11 813 aa16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 THAP2Q9H0W7 228 aa16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 SPHK2Q9NRA0 654 aa16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 CNOT8Q9UFF9 292 aaKnown RBP16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 EP300Q09472 2414 aaPredicted RBP16.17■□□□□ 0.18
SH3TC1-220ENST00000511002 HOXC11O43248 304 aaPredicted RBP16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 HRO43593 1189 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 IGLV3-25P01717 112 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 KRT3P12035 628 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 TFE3P19532 575 aaPredicted RBP16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 MATKP42679 507 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 GSDMDP57764 484 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 LPAL2Q16609 132 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 EMC10Q5UCC4 262 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 PLEKHA7Q6IQ23 1121 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 RAD9BQ6WBX8 426 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 TPGS1Q6ZTW0 290 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 USP33Q8TEY7 942 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 OTUB2Q96DC9 234 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 ARHGEF26Q96DR7 871 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 TRIM11Q96F44 468 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 MCEEQ96PE7 176 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 HHIPQ96QV1 700 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 BAG1Q99933 345 aaPredicted RBP16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 FAM204AQ9H8W3 233 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 CALCOCO1Q9P1Z2 691 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 MYO1AQ9UBC5 1043 aa16.16■□□□□ 0.18
SH3TC1-220ENST00000511002 SDK1Q7Z5N4 2213 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 SYNJ2BP-COX16A0A087WUM0 186 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 C2CD4BA6NLJ0 364 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 SIGLEC16A6NMB1 481 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 IRAK2O43187 625 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 TULP3O75386 442 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 KAT7O95251 611 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 TRUB2O95900 331 aaKnown RBP16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 MYBL1P10243 752 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 NOS2P35228 1153 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 RFC1P35251 1148 aaPredicted RBP16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 SULT1E1P49888 294 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 GALCP54803 685 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 RPL7AP62424 266 aaKnown RBP16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 GAD2Q05329 585 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 MAMLD1Q13495 774 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 TRIP4Q15650 581 aaPredicted RBP16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 ANO4Q32M45 955 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 FBXO43Q4G163 708 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 C2orf27AQ580R0 203 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 TMTC1Q8IUR5 882 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 CCDC33Q8N5R6 958 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 RXFP2Q8WXD0 754 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 BHMTQ93088 406 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 CFAP57Q96MR6 1250 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 SERPINB11Q96P15 392 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 PNKPQ96T60 521 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 TBCBQ99426 244 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 NPY6RQ99463 290 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 FAM126AQ9BYI3 521 aaPredicted RBP16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 EPC1Q9H2F5 836 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 SEMA4AQ9H3S1 761 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 ARHGEF4Q9NR80 690 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 COX16Q9P0S2 106 aa16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 LSM7Q9UK45 103 aaKnown RBP16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 SMG5Q9UPR3 1016 aaKnown RBP16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 HBS1LQ9Y450 684 aaKnown RBP16.15■□□□□ 0.18
SH3TC1-220ENST00000511002 GVINP1Q7Z2Y8 2422 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 NEDD8-MDP1E9PL57 170 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 IGLV3-27P01718 113 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 HNRNPLP14866 589 aaKnown RBP eCLIP16.14■□□□□ 0.179e-7■■■□□ 17
SH3TC1-220ENST00000511002 CORO1AP31146 461 aaKnown RBP16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 EIF2DP41214 584 aaKnown RBP16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 TBX4P57082 545 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 COG7P83436 770 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 OGDHQ02218 1023 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 DMC1Q14565 340 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 PPP2R5DQ14738 602 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 ARCQ7LC44 396 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 CCDC170Q8IYT3 715 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 PLD4Q96BZ4 506 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 FCRL2Q96LA5 508 aaPredicted RBP16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 TRIM7Q9C029 511 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 PARVAQ9NVD7 372 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 DDIT4Q9NX09 232 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 PLK2Q9NYY3 685 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 HCN2Q9UL51 889 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 STAP1Q9ULZ2 295 aa16.14■□□□□ 0.17
SH3TC1-220ENST00000511002 ANKRD62A6NC57 917 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 M0QYT0 321 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 NDUFA10O95299 355 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 LCA5LO95447 670 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 APODP05090 189 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 CYP1A2P05177 515 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 H2AFZP0C0S5 128 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 PDGFRAP16234 1089 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms