RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	TAC4	Q86UU9	113 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	FAM114A1	Q8IWE2	563 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	UNC45B	Q8IWX7	931 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	ADAM32	Q8TC27	787 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	GPT2	Q8TD30	523 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	UCMA	Q8WVF2	138 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	FAM149B1	Q96BN6	582 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	LMLN	Q96KR4	655 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	MRGPRX1	Q96LB2	322 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	PRICKLE1	Q96MT3	831 aa	Predicted RBP	12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	TUBGCP2	Q9BSJ2	902 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	SAMSN1	Q9NSI8	373 aa	Known RBP	12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	DNAJC12	Q9UKB3	198 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	PCDHGC3	Q9UN70	934 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	PCNX2	A6NKB5	2137 aa		12.53	□□□□□ -0.4
CHFR-208	ENST00000511001	FOXN3	O00409	490 aa	Predicted RBP	12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	NPC1	O15118	1278 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	SART1	O43290	800 aa	Known RBP	12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	PRKCSH	P14314	528 aa	Predicted RBP	12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	TAF5	Q15542	800 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	SPDYC	Q5MJ68	293 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	RBM43	Q6ZSC3	357 aa	Known RBP	12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	CHST9	Q7L1S5	443 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	ARMCX6	Q7L4S7	300 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	ADIPOR2	Q86V24	386 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	PASD1	Q8IV76	773 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	WFIKKN2	Q8TEU8	576 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	PIGK	Q92643	395 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	GOLGA1	Q92805	767 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	SERPINB11	Q96P15	392 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	CPXM1	Q96SM3	734 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	IRX2	Q9BZI1	471 aa	Predicted RBP	12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	MKRN2	Q9H000	416 aa	Known RBP	12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	TMEM74B	Q9NUR3	256 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	DACH1	Q9UI36	760 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	XPO7	Q9UIA9	1087 aa	Known RBP	12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	CYP8B1	Q9UNU6	501 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	TLR6	Q9Y2C9	796 aa		12.52	□□□□□ -0.41
CHFR-208	ENST00000511001	CHD6	Q8TD26	2715 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	DOCK4	Q8N1I0	1966 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	LNP1	A1A4G5	178 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	KCNJ18	B7U540	433 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	IRAK2	O43187	625 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	MAP3K13	O43283	966 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	TBL1X	O60907	577 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	ZNF217	O75362	1048 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	ADRB1	P08588	477 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	PABPC1	P11940	636 aa	Known RBP	12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	CD70	P32970	193 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	SLC11A2	P49281	568 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	COPA	P53621	1224 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	IRX4	P78413	519 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	KCNJ12	Q14500	433 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	MPP7	Q5T2T1	576 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	PEAR1	Q5VY43	1037 aa	Predicted RBP	12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	SLC36A4	Q6YBV0	504 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	METTL3	Q86U44	580 aa	Known RBP	12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	SLC47A2	Q86VL8	602 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	SLC41A1	Q8IVJ1	513 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	FAM71A	Q8IYT1	594 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	DEFB119	Q8N690	84 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	CYB5D2	Q8WUJ1	264 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	EDEM2	Q9BV94	578 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	CIPC	Q9C0C6	399 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	NUCKS1	Q9H1E3	243 aa	Known RBP	12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	LHX5	Q9H2C1	402 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	POPDC2	Q9HBU9	364 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	ABCB8	Q9NUT2	735 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	EVL	Q9UI08	416 aa	Predicted RBP	12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	GGA2	Q9UJY4	613 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	PILRB	Q9UKJ0	227 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	FHOD1	Q9Y613	1164 aa		12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	ATXN2	Q99700	1313 aa	Known RBP	12.51	□□□□□ -0.41
CHFR-208	ENST00000511001	CDX4	O14627	284 aa	Predicted RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	KHNYN	O15037	678 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	AP5Z1	O43299	807 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	TIMM44	O43615	452 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	TRUB2	O95900	331 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	HLA-E	P13747	358 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	ITPKA	P23677	461 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	RPS24	P62847	133 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	YWHAZ	P63104	245 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	RPL6	Q02878	288 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	PTK2	Q05397	1052 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	STARD3	Q14849	445 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	DRAP1	Q14919	205 aa	Predicted RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	PTPRN	Q16849	979 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	PTPN20	Q4JDL3	420 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	TCP11X2	Q5H9J9	407 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	MS4A13	Q5J8X5	152 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	PPM1J	Q5JR12	505 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	KLHDC7A	Q5VTJ3	777 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	LYSMD4	Q5XG99	296 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	MBLAC2	Q68D91	279 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	FAM183BP	Q6ZVS7	135 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	SYT12	Q8IV01	421 aa		12.5	□□□□□ -0.41

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