RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 CENPBP07199 599 aaPredicted RBP11.33□□□□□ -0.6
SNF8-207ENST00000509995 GIMD1P0DJR0 217 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 DGKAP23743 735 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 CYP4F2P78329 520 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 RBP5P82980 135 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 NAPEPLDQ6IQ20 393 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 RBM44Q6ZP01 1051 aaKnown RBP11.33□□□□□ -0.6
SNF8-207ENST00000509995 C14orf80Q86SX3 495 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 IQCHQ86VS3 1027 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 ATCAYQ86WG3 371 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 ZSCAN1Q8NBB4 408 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 RDH13Q8NBN7 331 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 IFI44Q8TCB0 444 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 CYB5D2Q8WUJ1 264 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 USP29Q9HBJ7 922 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 UCKL1Q9NWZ5 548 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 KCND2Q9NZV8 630 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 ACSL6Q9UKU0 697 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 SCML1Q9UN30 329 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 PCDHGA7Q9Y5G6 932 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 STYXL1Q9Y6J8 313 aa11.33□□□□□ -0.6
SNF8-207ENST00000509995 NPHP3-ACAD11A0A0J9YXS1 232 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 A1L4Q6 167 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 PP2D1A8MPX8 630 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 CLDN5O00501 218 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 MAGEC1O60732 1142 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 LIPCP11150 499 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
SNF8-207ENST00000509995 SLC5A2P31639 672 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 ATP5C1P36542 298 aaKnown RBP11.32□□□□□ -0.6
SNF8-207ENST00000509995 DCTP40126 519 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 OXCT1P55809 520 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 KCNAB2Q13303 367 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 KRT79Q5XKE5 535 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 SLFN12LQ6IEE8 588 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 SYT2Q8N9I0 419 aaPredicted RBP11.32□□□□□ -0.6
SNF8-207ENST00000509995 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNF8-207ENST00000509995 SSC4DQ8WTU2 575 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 CACTINQ8WUQ7 758 aaKnown RBP11.32□□□□□ -0.6
SNF8-207ENST00000509995 ARRDC3Q96B67 414 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 KCNK16Q96T55 309 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 RAB34Q9BZG1 259 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 MTMR12Q9C0I1 747 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 RSPH9Q9H1X1 276 aaPredicted RBP11.32□□□□□ -0.6
SNF8-207ENST00000509995 KDM4CQ9H3R0 1056 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 ZSWIM6Q9HCJ5 1215 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 CYLDQ9NQC7 956 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 EVA1BQ9NVM1 165 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 TUBD1Q9UJT1 453 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 TPX2Q9ULW0 747 aaKnown RBP11.32□□□□□ -0.6
SNF8-207ENST00000509995 PLA2G4CQ9UP65 541 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 NME7Q9Y5B8 376 aa11.32□□□□□ -0.6
SNF8-207ENST00000509995 PDZD2O15018 2839 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 CCDC187A0A096LP49 1063 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 A0A1W2PP55 124 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 VPS37CA5D8V6 355 aaPredicted RBP11.31□□□□□ -0.6
SNF8-207ENST00000509995 LATO43561 262 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 CDC45O75419 566 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 TCEA3O75764 348 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 STC2O76061 302 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 ALPPL2P10696 532 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 WT1P19544 449 aaPredicted RBP11.31□□□□□ -0.6
SNF8-207ENST00000509995 CHKAP35790 457 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 TRAPPC10P48553 1259 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 HARS2P49590 506 aaKnown RBP11.31□□□□□ -0.6
SNF8-207ENST00000509995 SLC12A3P55017 1021 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 POLE2P56282 527 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 OVGP1Q12889 678 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 MANEAQ5SRI9 462 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 VASH2Q86V25 355 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 SRRM1Q8IYB3 904 aaKnown RBP11.31□□□□□ -0.6
SNF8-207ENST00000509995 B3GNT5Q9BYG0 378 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 SLC2A11Q9BYW1 496 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 NEUROG2Q9H2A3 272 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 DPEP3Q9H4B8 488 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 TLR8Q9NR97 1041 aaKnown RBP11.31□□□□□ -0.6
SNF8-207ENST00000509995 NLGN3Q9NZ94 848 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 ODF2LQ9ULJ1 636 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 FZD4Q9ULV1 537 aa11.31□□□□□ -0.6
SNF8-207ENST00000509995 MTORP42345 2549 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
SNF8-207ENST00000509995 MDM4O15151 490 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 MID1O15344 667 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 RNASEH2AO75792 299 aaKnown RBP11.3□□□□□ -0.6
SNF8-207ENST00000509995 KLKB1P03952 638 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 RNF224P0DH78 156 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 PTPN1P18031 435 aaKnown RBP11.3□□□□□ -0.6
SNF8-207ENST00000509995 GRNP28799 593 aaKnown RBP11.3□□□□□ -0.6
SNF8-207ENST00000509995 PDX1P52945 283 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 ADPRHP54922 357 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 PPP2CBP62714 309 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 PPP2CAP67775 309 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 GTF2BQ00403 316 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 PDE4CQ08493 712 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 SFSWAPQ12872 951 aaKnown RBP11.3□□□□□ -0.6
SNF8-207ENST00000509995 FHL5Q5TD97 284 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 BORAQ6PGQ7 559 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 KLHDC10Q6PID8 442 aa11.3□□□□□ -0.6
SNF8-207ENST00000509995 MYCT1Q8N699 235 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms