RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 GOLGA8MH3BSY2 632 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 APOL1O14791 398 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CIDEAO60543 219 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 FMO6PO60774 539 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 NOL3O60936 208 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 KERAO60938 352 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 SOAT2O75908 522 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 KLHL2O95198 593 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 SNRNP70P08621 437 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 ENO2P09104 434 aaPredicted RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CLTBP09497 229 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 HLA-DPA1P20036 260 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CYP3A7P24462 503 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 TRIM23P36406 574 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 MSH2P43246 934 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CBX5P45973 191 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 MAP3K7CLP57077 242 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CARD18P57730 90 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 YBEYP58557 167 aaPredicted RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 VBP1P61758 197 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 POLR2GP62487 172 aaKnown RBP eCLIP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 RPL11P62913 178 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 GSTO1P78417 241 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 MRPS5P82675 430 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 HTD2P86397 168 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 TFAP4Q01664 338 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 RNASELQ05823 741 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 SSRP1Q08945 709 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 GALNT1Q10472 559 aaPredicted RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 MSLNQ13421 630 aaPredicted RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 TOP3AQ13472 1001 aaPredicted RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CUL1Q13616 776 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 GTF2H3Q13889 308 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 NCF4Q15080 339 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 STK38Q15208 465 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 TBR1Q16650 682 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 ANO4Q32M45 955 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CCDC153Q494R4 210 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 IGSF11Q5DX21 431 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 TMEM240Q5SV17 173 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CLEC2AQ6UVW9 174 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 LBX2Q6XYB7 198 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CHST15Q7LFX5 561 aaPredicted RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 FAM83AQ86UY5 434 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 COMTD1Q86VU5 262 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 SRRM1Q8IYB3 904 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 GPR135Q8IZ08 494 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 PRR18Q8N4B5 295 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 IQUBQ8NA54 791 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 GMCL1P1Q8NEA9 526 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 SPPL3Q8TCT6 385 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 SLC26A7Q8TE54 656 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CPLX3Q8WVH0 158 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 KIFAP3Q92845 792 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 LRRC59Q96AG4 307 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 HDAC11Q96DB2 347 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 SHDQ96IW2 340 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CNOT6LQ96LI5 555 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 LRGUKQ96M69 825 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 LENG8Q96PV6 779 aaPredicted RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 MNTQ99583 582 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 HNRNPABQ99729 332 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 COQ7Q99807 217 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 AIFM2Q9BRQ8 373 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 NUSAP1Q9BXS6 441 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 C1orf21Q9H246 121 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 KIF9Q9HAQ2 790 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 SRP68Q9UHB9 627 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 IL19Q9UHD0 177 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 ANKRD6Q9Y2G4 727 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 CBY1Q9Y3M2 126 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 TIMM13Q9Y5L4 95 aaPredicted RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 KIAA0556O60303 1618 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 ROCK2O75116 1388 aaKnown RBP4.74□□□□□ -1.65
NIPBL-206ENST00000509429 MBD5Q9P267 1494 aa4.74□□□□□ -1.65
NIPBL-206ENST00000509429 E9PCH4 1651 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 MAPK8IP3Q9UPT6 1336 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 RAPGEF6Q8TEU7 1601 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.73□□□□□ -1.65
NIPBL-206ENST00000509429 A0A1B0GWJ7 208 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 CCDC78A2IDD5 438 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 CCDC162PA2VCL2 907 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 A6NNZ2 444 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 LRRIQ3A6PVS8 624 aaPredicted RBP4.73□□□□□ -1.65
NIPBL-206ENST00000509429 TPP1O14773 563 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 IDH3BO43837 385 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 DOK2O60496 412 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 TACC1O75410 805 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 CLN5O75503 358 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 FLOT1O75955 427 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 SGPL1O95470 568 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 C1RP00736 705 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 RB1P06400 928 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 RETP07949 1114 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 ABCB1P08183 1280 aaPredicted RBP4.73□□□□□ -1.65
NIPBL-206ENST00000509429 PDE6AP16499 860 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 HSPA6P17066 643 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 ALOX12P18054 663 aa4.73□□□□□ -1.65
NIPBL-206ENST00000509429 POLR2EP19388 210 aaKnown RBP4.73□□□□□ -1.65
NIPBL-206ENST00000509429 PRKACBP22694 351 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms