RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 TMA16Q96EY4 203 aaKnown RBP15.36■□□□□ 0.05
RNF4-213ENST00000509388 C1orf74Q96LT6 269 aa15.36■□□□□ 0.05
RNF4-213ENST00000509388 NECAB3Q96P71 396 aaPredicted RBP15.36■□□□□ 0.05
RNF4-213ENST00000509388 ECT2Q9H8V3 914 aa15.36■□□□□ 0.05
RNF4-213ENST00000509388 SPHK2Q9NRA0 654 aa15.36■□□□□ 0.05
RNF4-213ENST00000509388 TRIM10Q9UDY6 481 aa15.36■□□□□ 0.05
RNF4-213ENST00000509388 XPO7Q9UIA9 1087 aaKnown RBP15.36■□□□□ 0.05
RNF4-213ENST00000509388 STOML2Q9UJZ1 356 aa15.36■□□□□ 0.05
RNF4-213ENST00000509388 HS3ST4Q9Y661 456 aa15.36■□□□□ 0.05
RNF4-213ENST00000509388 ALG6Q9Y672 507 aa15.36■□□□□ 0.05
RNF4-213ENST00000509388 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.36■□□□□ 0.05
RNF4-213ENST00000509388 OBSL1O75147 1896 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 ANAPC1Q9H1A4 1944 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 A0A0U1RQJ8 604 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 TRDMT1O14717 391 aaKnown RBP15.35■□□□□ 0.05
RNF4-213ENST00000509388 NARSO43776 548 aaKnown RBP15.35■□□□□ 0.05
RNF4-213ENST00000509388 SRGAP2O75044 1071 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 MOCS3O95396 460 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 KRT7P08729 469 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 TNNT1P13805 278 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 COMTP21964 271 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 GJC1P36383 396 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 VCPP55072 806 aaKnown RBP15.35■□□□□ 0.05
RNF4-213ENST00000509388 GAD2Q05329 585 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 TNK2Q07912 1038 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 AUHQ13825 339 aaKnown RBP15.35■□□□□ 0.05
RNF4-213ENST00000509388 DHCR24Q15392 516 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 RABGAP1LQ5R372 815 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 LY6G5CQ5SRR4 150 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 DAB2IPQ5VWQ8 1189 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 C11orf63Q6NUN7 778 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 RFWD3Q6PCD5 774 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 ZNF662Q6ZS27 426 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 UBALD2Q8IYN6 164 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 LGI2Q8N0V4 545 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 ARFGAP1Q8N6T3 406 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 ATRIPQ8WXE1 791 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 DNASE1L2Q92874 299 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 ASIC4Q96FT7 647 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 RPRD1AQ96P16 312 aaPredicted RBP15.35■□□□□ 0.05
RNF4-213ENST00000509388 BBS2Q9BXC9 721 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 IRX2Q9BZI1 471 aaPredicted RBP15.35■□□□□ 0.05
RNF4-213ENST00000509388 OSBPL2Q9H1P3 480 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 DHX35Q9H5Z1 703 aaKnown RBP15.35■□□□□ 0.05
RNF4-213ENST00000509388 TMPRSS4Q9NRS4 437 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 GTSE1Q9NYZ3 720 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 OR12D3Q9UGF7 316 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 SALL4Q9UJQ4 1053 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 FBXL21Q9UKT6 434 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 FZD10Q9ULW2 581 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 DUSP12Q9UNI6 340 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 AP4E1Q9UPM8 1137 aa15.35■□□□□ 0.05
RNF4-213ENST00000509388 NEDD8-MDP1E9PL57 170 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 PALMO75781 387 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 CYP17A1P05093 508 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 ADH5P11766 374 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 SCAPQ12770 1279 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 FAM133BQ5BKY9 247 aaKnown RBP15.34■□□□□ 0.05
RNF4-213ENST00000509388 KCNT1Q5JUK3 1230 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 PIK3R6Q5UE93 754 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 NADSYN1Q6IA69 706 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 RHBDF2Q6PJF5 856 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 TMEM25Q86YD3 366 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 PSTKQ8IV42 348 aaKnown RBP15.34■□□□□ 0.05
RNF4-213ENST00000509388 RHOT1Q8IXI2 618 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 FAM217AQ8IXS0 508 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 HJURPQ8NCD3 748 aaPredicted RBP15.34■□□□□ 0.05
RNF4-213ENST00000509388 HSPH1Q92598 858 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 BHMTQ93088 406 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 EXOC4Q96A65 974 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 ALS2CR12Q96Q35 445 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 XPO6Q96QU8 1125 aaKnown RBP15.34■□□□□ 0.05
RNF4-213ENST00000509388 EPAS1Q99814 870 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 TRPV5Q9NQA5 729 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 HPS4Q9NQG7 708 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 SLC2A4RGQ9NR83 387 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 TRMT1Q9NXH9 659 aaKnown RBP15.34■□□□□ 0.05
RNF4-213ENST00000509388 STIM2Q9P246 746 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 VANGL2Q9ULK5 521 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.34■□□□□ 0.05
RNF4-213ENST00000509388 HYOU1Q9Y4L1 999 aa15.34■□□□□ 0.05
RNF4-213ENST00000509388 SPTBN5Q9NRC6 3674 aaKnown RBP15.34■□□□□ 0.05
RNF4-213ENST00000509388 DENND4CQ5VZ89 1909 aa15.33■□□□□ 0.05
RNF4-213ENST00000509388 XIRP2A4UGR9 3374 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 GOLGA6L9A6NEM1 432 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 CREB3O43889 395 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 TBL1XO60907 577 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 SLC6A4P31645 630 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 GGCXP38435 758 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 KRT81Q14533 505 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 SMTNL2Q2TAL5 461 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 RWDD4Q6NW29 188 aaKnown RBP15.33■□□□□ 0.04
RNF4-213ENST00000509388 FBXL22Q6P050 247 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 TEKT4Q8WW24 435 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 PEBP4Q96S96 227 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 SNRNP25Q9BV90 132 aaKnown RBP15.33■□□□□ 0.04
RNF4-213ENST00000509388 C8orf33Q9H7E9 229 aaPredicted RBP15.33■□□□□ 0.04
RNF4-213ENST00000509388 CD320Q9NPF0 282 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 ANLNQ9NQW6 1124 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms