RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 SLITRK6Q9H5Y7 841 aa4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 CARS2Q9HA77 564 aaKnown RBP4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 HPS4Q9NQG7 708 aa4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 GKN1Q9NS71 199 aa4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 DSEQ9UL01 958 aa4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 UBQLN1Q9UMX0 589 aaKnown RBP4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 DERAQ9Y315 318 aa4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 NPFFR2Q9Y5X5 522 aa4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 TCHHQ07283 1943 aa4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 PCDH15Q96QU1 1955 aa4.69□□□□□ -1.66
CALCOCO2-213ENST00000509112 FRYQ5TBA9 3013 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ATG2BQ96BY7 2078 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ASCC3Q8N3C0 2202 aaKnown RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 LAMA1P25391 3075 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 FITM1A5D6W6 292 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 BTBD18B2RXH4 712 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 H0YCG3 227 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 LARGE1O95461 756 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 CTDNEP1O95476 244 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 PRAMEF12O95522 483 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 CD3EP07766 207 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 CLTAP09496 248 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ZGLP1P0C6A0 271 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 PABPC1P11940 636 aaKnown RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 NAT1P18440 290 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 HSD3B2P26439 372 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ABCD1P33897 745 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 GJA4P35212 333 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 PI4KAP42356 2102 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 TRAPPC10P48553 1259 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 SEPHS1P49903 392 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 GALK1P51570 392 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 MRPS21P82921 87 aaKnown RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 CREB5Q02930 508 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 BNIP3Q12983 259 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 SEMA3BQ13214 749 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 KCNAB2Q13303 367 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 DMP1Q13316 513 aaPredicted RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 BYSLQ13895 437 aaKnown RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 DMC1Q14565 340 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 NOLC1Q14978 699 aaKnown RBP eCLIP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 VEPH1Q14D04 833 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ANKRD1Q15327 319 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 STXBP5Q5T5C0 1151 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 SPATA1Q5VX52 437 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 HLA-DQA1Q5Y7H0 255 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ARMCX5Q6P1M9 558 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 MAEAQ7L5Y9 396 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 MAMDC2Q7Z304 686 aaPredicted RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 RABEPKQ7Z6M1 372 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 USP37Q86T82 979 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 MON1AQ86VX9 555 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 PROSER1Q86XN7 944 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 DIS3L2Q8IYB7 885 aaKnown RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ABCA7Q8IZY2 2146 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 DAW1Q8N136 415 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 CPA6Q8N4T0 437 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 CEP76Q8TAP6 659 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 SPATA18Q8TC71 538 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 LEO1Q8WVC0 666 aaPredicted RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 OSCP1Q8WVF1 389 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 BTN2A2Q8WVV5 523 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ZCCHC14Q8WYQ9 949 aaKnown RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 CD101Q93033 1021 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 PPP1R14AQ96A00 147 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 C18orf25Q96B23 403 aaPredicted RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 TRMT2BQ96GJ1 504 aaKnown RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 C1orf159Q96HA4 380 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 MAP6Q96JE9 813 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ZFYVE19Q96K21 471 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 CEP295NLQ96MC4 621 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 PTCHD1Q96NR3 888 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 P2RY13Q9BPV8 354 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 TARS2Q9BW92 718 aaKnown RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 SLC46A2Q9BY10 475 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ZCWPW1Q9H0M4 648 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 TMEM60Q9H2L4 133 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 TMEM206Q9H813 350 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ZFP64Q9NPA5 681 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 KMT5AQ9NQR1 393 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 TDP1Q9NUW8 608 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ERVK13-1Q9NX77 482 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 KCND2Q9NZV8 630 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ORC3Q9UBD5 711 aaPredicted RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 UXTQ9UBK9 157 aaPredicted RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 DKK4Q9UBT3 224 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 RALYQ9UKM9 306 aaKnown RBP4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 MMP17Q9ULZ9 603 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 ZZEF1O43149 2961 aa4.68□□□□□ -1.66
CALCOCO2-213ENST00000509112 SCN1AP35498 2009 aa4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 TRBV23-1A0A0A0MS06 115 aa4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 ANO9A1A5B4 782 aa4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 OTOL1A6NHN0 477 aaPredicted RBP4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 FADS2P1A8MWK0 482 aa4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 LAD1O00515 517 aa4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 PIRO00625 290 aa4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 CLDN3O15551 220 aa4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 SLC26A4O43511 780 aa4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 FAM189A1O60320 539 aa4.67□□□□□ -1.66
CALCOCO2-213ENST00000509112 RFPL3O75679 317 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms