RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 OR5B17Q8NGF7 314 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 RLN3Q8WXF3 142 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 PCED1BQ96HM7 432 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 ANKRD36BP1Q96IX9 119 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 DUSP9Q99956 384 aaKnown RBP9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 NUSAP1Q9BXS6 441 aaKnown RBP9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 PCIF1Q9H4Z3 704 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 SLC32A1Q9H598 525 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 CCDC39Q9UFE4 941 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 PILRBQ9UKJ0 227 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 MSRB2Q9Y3D2 182 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 NEUROG3Q9Y4Z2 214 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 NME7Q9Y5B8 376 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 CPQQ9Y646 472 aa9.15□□□□□ -0.94
COL4A3BP-206ENST00000508809 PTPRJQ12913 1337 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 PCDH15Q96QU1 1955 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZNF233A6NK53 670 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 F8VP50 259 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 KLF8O95600 359 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 CST3P01034 146 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 CAPNS1P04632 268 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 APODP05090 189 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 ENGP17813 658 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 GSTT1P30711 240 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 GNL1P36915 607 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 PSMC1P62191 440 aaKnown RBP9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 TAF10Q12962 218 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 SNX30Q5VWJ9 437 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 LMBRD2Q68DH5 695 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 BEND4Q6ZU67 534 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 C12orf40Q86WS4 652 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 DDX42Q86XP3 938 aaKnown RBP eCLIP9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 TMEFF1Q8IYR6 380 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 SYCP3Q8IZU3 236 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 GLIS3Q8NEA6 775 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 OTUB2Q96DC9 234 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 FGFBP2Q9BYJ0 223 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 TMEM30AQ9NV96 361 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 IL37Q9NZH6 218 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 TBC1D14Q9P2M4 693 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 FBXO2Q9UK22 296 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 SMC3Q9UQE7 1217 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 CLIC4Q9Y696 253 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 MORC2Q9Y6X9 1032 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 ASXL3Q9C0F0 2248 aa9.14□□□□□ -0.95
COL4A3BP-206ENST00000508809 MYH10P35580 1976 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 E2F8A0AVK6 867 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 H0Y626 953 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 PRPF6O94906 941 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 TRIM16O95361 564 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 IGLV1-40P01703 118 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 TNNC2P02585 160 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 ADH5P11766 374 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 PTPN1P18031 435 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 ANXA13P27216 316 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 HOXD13P35453 343 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 CACNA2D1P54289 1103 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 CYP27A1Q02318 531 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 RESTQ13127 1097 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 COL9A2Q14055 689 aaPredicted RBP9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 DUOXA1Q1HG43 343 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 LY6G5CQ5SRR4 150 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 TDRD10Q5VZ19 366 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 LRSAM1Q6UWE0 723 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 NXPE4Q6UWF7 544 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 CCDC73Q6ZRK6 1079 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 TRAPPC11Q7Z392 1133 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 CBWD2Q8IUF1 395 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 WDR49Q8IV35 697 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 GIMAP7Q8NHV1 300 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 CEP76Q8TAP6 659 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 OVCA2Q8WZ82 227 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 CLIC6Q96NY7 704 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 MRPL45Q9BRJ2 306 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 NRSN2Q9GZP1 204 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 C7orf69Q9H7B7 122 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 CAPN10Q9HC96 672 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 KIAA1586Q9HCI6 787 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 CD248Q9HCU0 757 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 ARHGEF4Q9NR80 690 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 PANK4Q9NVE7 773 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 SMPD4Q9NXE4 827 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 CFAP97Q9P2B7 532 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 R3HCC1Q9Y3T6 440 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 GOLGA4Q13439 2230 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 PLXNB3Q9ULL4 1909 aa9.13□□□□□ -0.95
COL4A3BP-206ENST00000508809 ADAMTS20P59510 1910 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 A0A1W2PQF6 199 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 FAM92AA1XBS5 289 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 TAF4O00268 1085 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 HOXC11O43248 304 aaPredicted RBP9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 AP5Z1O43299 807 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 HYAL3O43820 417 aaPredicted RBP9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 TIAF1O95411 115 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 SERPINF2P08697 491 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZDHHC11BP0C7U3 371 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 IDEP14735 1019 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms