RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 MAGEA4P43358 317 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 GLUD2P49448 558 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 NRLP54845 237 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 NRG1Q02297 640 aaPredicted RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 DSG1Q02413 1049 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 DUSP4Q13115 394 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 EMC10Q5UCC4 262 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 MANEALQ5VSG8 457 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 ANKRD22Q5VYY1 191 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 CENPUQ71F23 418 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 B4GALNT4Q76KP1 1039 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 STKLD1Q8NE28 680 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 FAM76AQ8TAV0 307 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 RNF34Q969K3 372 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 FBXO32Q969P5 355 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 EXOC4Q96A65 974 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 SLC39A13Q96H72 371 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 TTC25Q96NG3 672 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 ROPN1BQ9BZX4 212 aaPredicted RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 ROPN1Q9HAT0 212 aaPredicted RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 IL23AQ9NPF7 189 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 OLA1Q9NTK5 396 aaKnown RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 NEU3Q9UQ49 428 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 KCNU1A8MYU2 1149 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 ALOX15BO15296 676 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 NCAM2O15394 837 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 SOAT2O75908 522 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 TMEM63AO94886 807 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 LRIG2O94898 1065 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 VAV1P15498 845 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 ATF6P18850 670 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 BTG3Q14201 252 aaPredicted RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 HIF1AQ16665 826 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 KRT71Q3SY84 523 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 HEATR6Q6AI08 1181 aaKnown RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 UBE2Q1Q7Z7E8 422 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 COLGALT1Q8NBJ5 622 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 HTR3CQ8WXA8 447 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 PGM2Q96G03 612 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 TMEM169Q96HH4 297 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 FRMD8Q9BZ67 464 aaPredicted RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 BRD8Q9H0E9 1235 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 TLR8Q9NR97 1041 aaKnown RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 DNAJC17Q9NVM6 304 aaKnown RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
DDX41-207ENST00000507900 AFF4Q9UHB7 1163 aaKnown RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 SFMBT1Q9UHJ3 866 aa17.11■□□□□ 0.33
DDX41-207ENST00000507900 MRPL42Q9Y6G3 142 aaKnown RBP17.11■□□□□ 0.33
DDX41-207ENST00000507900 ALPK3Q96L96 1907 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 KIAA0100Q14667 2235 aaKnown RBP17.1■□□□□ 0.33
DDX41-207ENST00000507900 MSI1O43347 362 aaKnown RBP17.1■□□□□ 0.33
DDX41-207ENST00000507900 TCEA3O75764 348 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 ACSL3O95573 720 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 SLC2A3P11169 496 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 SERPINB6P35237 376 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 TUFMP49411 452 aaKnown RBP17.1■□□□□ 0.33
DDX41-207ENST00000507900 GYS2P54840 703 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 ARL4CP56559 192 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 BASP1P80723 227 aaKnown RBP17.1■□□□□ 0.33
DDX41-207ENST00000507900 TAF10Q12962 218 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 TERF2Q15554 542 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 KYNUQ16719 465 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 SPOUT1Q5T280 376 aaKnown RBP17.1■□□□□ 0.33
DDX41-207ENST00000507900 ARTNQ5T4W7 220 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 TPGS2Q68CL5 300 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 KIAA1841Q6NSI8 718 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 PPP1R21Q6ZMI0 780 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 GPR65Q8IYL9 337 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 ZNF276Q8N554 614 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 CLSTN3Q9BQT9 956 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 KLC2Q9H0B6 622 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 SAYSD1Q9NPB0 183 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 RAB6BQ9NRW1 208 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 SPG21Q9NZD8 308 aa17.1■□□□□ 0.33
DDX41-207ENST00000507900 XPO7Q9UIA9 1087 aaKnown RBP17.1■□□□□ 0.33
DDX41-207ENST00000507900 A0A0A0MRY4 1105 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 TCRBV7S3A2A0A539 114 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 SLC38A8A6NNN8 435 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 PAGE1O75459 146 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 ABLIM3O94929 683 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 OR1D2P34982 312 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 C6orf118Q5T5N4 469 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 TMCO2Q7Z6W1 182 aaPredicted RBP17.09■□□□□ 0.33
DDX41-207ENST00000507900 DDX53Q86TM3 631 aaKnown RBP17.09■□□□□ 0.33
DDX41-207ENST00000507900 CCDC110Q8TBZ0 833 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 GPR152Q8TDT2 470 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 FCRL2Q96LA5 508 aaPredicted RBP17.09■□□□□ 0.33
DDX41-207ENST00000507900 SPATA13Q96N96 652 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 FERMT1Q9BQL6 677 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 PRDM12Q9H4Q4 367 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 LRRC4CQ9HCJ2 640 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 SNX10Q9Y5X0 201 aa17.09■□□□□ 0.33
DDX41-207ENST00000507900 FGF10O15520 208 aaPredicted RBP17.08■□□□□ 0.32
DDX41-207ENST00000507900 ACRP10323 421 aa17.08■□□□□ 0.32
DDX41-207ENST00000507900 MX2P20592 715 aa17.08■□□□□ 0.32
DDX41-207ENST00000507900 EPHB2P29323 1055 aa17.08■□□□□ 0.32
DDX41-207ENST00000507900 PPM1AP35813 382 aa17.08■□□□□ 0.32
DDX41-207ENST00000507900 PPIDQ08752 370 aaKnown RBP17.08■□□□□ 0.32
DDX41-207ENST00000507900 GALNT2Q10471 571 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms