RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 FAM72BQ86X60 149 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 DENND1CQ8IV53 801 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 ITFG1Q8TB96 612 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 FAM71BQ8TC56 605 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 BTN2A3PQ96KV6 586 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 RNF157Q96PX1 679 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 EPAS1Q99814 870 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 ZNF670Q9BS34 389 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 HERPUD2Q9BSE4 406 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 HS3ST4Q9Y661 456 aa18.07■□□□□ 0.48
RNF4-209ENST00000507784 GOLGA6L10A0A0M3HER8 536 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 GOLGA6L7A0A1B0GV03 622 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 APOL1O14791 398 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 ACSL4O60488 711 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 STC2O76061 302 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 OLFM2O95897 454 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 FSHRP23945 695 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 IL4RP24394 825 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 CORO1AP31146 461 aaKnown RBP18.06■□□□□ 0.48
RNF4-209ENST00000507784 AVPR1AP37288 418 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 SLC11A2P49281 568 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 SLC7A9P82251 487 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 TFDP2Q14188 446 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 TAZQ16635 292 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 RAP1GAP2Q684P5 730 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 RWDD4Q6NW29 188 aaKnown RBP18.06■□□□□ 0.48
RNF4-209ENST00000507784 WBP2Q969T9 261 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 HAUS1Q96CS2 278 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 CSPG4P5Q96PW8 444 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 SMG9Q9H0W8 520 aaKnown RBP18.06■□□□□ 0.48
RNF4-209ENST00000507784 LSM7Q9UK45 103 aaKnown RBP18.06■□□□□ 0.48
RNF4-209ENST00000507784 SH3BP1Q9Y3L3 701 aa18.06■□□□□ 0.48
RNF4-209ENST00000507784 HOXB8P17481 243 aaPredicted RBP18.05■□□□□ 0.48
RNF4-209ENST00000507784 MLLT6P55198 1093 aaPredicted RBP18.05■□□□□ 0.48
RNF4-209ENST00000507784 ADCY2Q08462 1091 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 MTA1Q13330 715 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 CBX2Q14781 532 aaPredicted RBP18.05■□□□□ 0.48
RNF4-209ENST00000507784 MS4A13Q5J8X5 152 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 PIK3R6Q5UE93 754 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 CES5AQ6NT32 575 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 C1orf228Q6PIY5 440 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 LRRC31Q6UY01 552 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 C14orf80Q86SX3 495 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 CHSY1Q86X52 802 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 KLHL7Q8IXQ5 586 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 CMTM8Q8IZV2 173 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 SPATA4Q8NEY3 305 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 PCDH19Q8TAB3 1148 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 TSC1Q92574 1164 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 DCLK3Q9C098 648 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 CFAP97Q9P2B7 532 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 RCOR3Q9P2K3 495 aaPredicted RBP18.05■□□□□ 0.48
RNF4-209ENST00000507784 VANGL2Q9ULK5 521 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 EFR3BQ9Y2G0 817 aa18.05■□□□□ 0.48
RNF4-209ENST00000507784 HELZP42694 1942 aaKnown RBP18.05■□□□□ 0.48
RNF4-209ENST00000507784 SOBPA7XYQ1 873 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 SCAMP3O14828 347 aaKnown RBP18.04■□□□□ 0.48
RNF4-209ENST00000507784 LRIG2O94898 1065 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 POU3F3P20264 500 aaPredicted RBP18.04■□□□□ 0.48
RNF4-209ENST00000507784 TACR2P21452 398 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 EPHB2P29323 1055 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 ZNF135P52742 658 aaPredicted RBP18.04■□□□□ 0.48
RNF4-209ENST00000507784 ATAT1Q5SQI0 421 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 RFX8Q6ZV50 586 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 BBS12Q6ZW61 710 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 GET4Q7L5D6 327 aaPredicted RBP18.04■□□□□ 0.48
RNF4-209ENST00000507784 VSIG1Q86XK7 387 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 LRRN4CLQ8ND94 238 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 C1orf54Q8WWF1 131 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 TBC1D31Q96DN5 1066 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 RPGRIP1Q96KN7 1286 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 ZFRQ96KR1 1074 aaKnown RBP18.04■□□□□ 0.48
RNF4-209ENST00000507784 C1orf74Q96LT6 269 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 FAM118BQ9BPY3 351 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 RBM12Q9NTZ6 932 aaKnown RBP18.04■□□□□ 0.48
RNF4-209ENST00000507784 CLEC1BQ9P126 229 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 CDH22Q9UJ99 828 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 AGO1Q9UL18 857 aaKnown RBP18.04■□□□□ 0.48
RNF4-209ENST00000507784 NR2E1Q9Y466 385 aa18.04■□□□□ 0.48
RNF4-209ENST00000507784 CLUHO75153 1309 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 ZNF487B1APH4 448 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 E9PAM4 449 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 LEFTY2O00292 366 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 PAPLNO95428 1278 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 KLKB1P03952 638 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 ZFXP17010 805 aaPredicted RBP18.03■□□□□ 0.48
RNF4-209ENST00000507784 HCAR3P49019 387 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 DLX2Q07687 328 aaPredicted RBP18.03■□□□□ 0.48
RNF4-209ENST00000507784 SEMA3BQ13214 749 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 SNX1Q13596 522 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 AUHQ13825 339 aaKnown RBP18.03■□□□□ 0.48
RNF4-209ENST00000507784 NADSYN1Q6IA69 706 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 NPNTQ6UXI9 565 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 DDX42Q86XP3 938 aaKnown RBP eCLIP18.03■□□□□ 0.48
RNF4-209ENST00000507784 LGI2Q8N0V4 545 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 PQLC3Q8N755 202 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 SH3RF2Q8TEC5 729 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 AZIN2Q96A70 460 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 MAGOHBQ96A72 148 aaKnown RBP18.03■□□□□ 0.48
RNF4-209ENST00000507784 FAF2Q96CS3 445 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms