RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 SLC2A3P11169 496 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 CHRM1P11229 460 aaPredicted RBP18.85■□□□□ 0.61
NPHP4-210ENST00000506941 PDGFRAP16234 1089 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 HOXD9P28356 352 aaPredicted RBP18.85■□□□□ 0.61
NPHP4-210ENST00000506941 PTPN9P43378 593 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 ATP11AP98196 1134 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 DEUP1Q05D60 604 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 ASTE1Q2TB18 679 aaPredicted RBP18.85■□□□□ 0.61
NPHP4-210ENST00000506941 PIK3R6Q5UE93 754 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 PLEKHA7Q6IQ23 1121 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 PKN3Q6P5Z2 889 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 VPS36Q86VN1 386 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 CNGA4Q8IV77 575 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 TC2NQ8N9U0 490 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 DDI1Q8WTU0 396 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 RNF34Q969K3 372 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 MCEEQ96PE7 176 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 PRMT1Q99873 361 aaKnown RBP18.85■□□□□ 0.61
NPHP4-210ENST00000506941 ARHGEF4Q9NR80 690 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 DEC1Q9P2X7 70 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 RAPGEFL1Q9UHV5 662 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 FBXO10Q9UK96 956 aa18.85■□□□□ 0.61
NPHP4-210ENST00000506941 NYNRINQ9P2P1 1898 aaKnown RBP18.85■□□□□ 0.61
NPHP4-210ENST00000506941 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.84■□□□□ 0.61
NPHP4-210ENST00000506941 AKR1B15C9JRZ8 316 aaPredicted RBP18.84■□□□□ 0.61
NPHP4-210ENST00000506941 ENDOD1O94919 500 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 CISD3P0C7P0 127 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 SDC4P31431 198 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 MAGEA9P43362 315 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 OGDHQ02218 1023 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 MTAPQ13126 283 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 MAPK8IP2Q13387 824 aaPredicted RBP18.84■□□□□ 0.61
NPHP4-210ENST00000506941 MAMLD1Q13495 774 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 CDO1Q16878 200 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 MPPE1Q53F39 396 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 MS4A13Q5J8X5 152 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 RAP1GAP2Q684P5 730 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 RNF43Q68DV7 783 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 ATP6V0D2Q8N8Y2 350 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 EXOC4Q96A65 974 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 ZNF653Q96CK0 615 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 XPO6Q96QU8 1125 aaKnown RBP18.84■□□□□ 0.61
NPHP4-210ENST00000506941 CHP1Q99653 195 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 TMPRSS4Q9NRS4 437 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 C2orf42Q9NWW7 574 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 ARHGEF38Q9NXL2 777 aa18.84■□□□□ 0.61
NPHP4-210ENST00000506941 CHD5Q8TDI0 1954 aa18.83■□□□□ 0.61
NPHP4-210ENST00000506941 A0A0A0MRY4 1105 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 GALR2O43603 387 aaPredicted RBP18.83■□□□□ 0.6
NPHP4-210ENST00000506941 RNF40O75150 1001 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 PAGE1O75459 146 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 F9P00740 461 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 CYBBP04839 570 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 APODP05090 189 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 ABCB4P21439 1286 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 TACR2P21452 398 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 GPD1P21695 349 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 RDXP35241 583 aaKnown RBP18.83■□□□□ 0.6
NPHP4-210ENST00000506941 GRIA2P42262 883 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 RPS24P62847 133 aaKnown RBP18.83■□□□□ 0.6
NPHP4-210ENST00000506941 GFPT1Q06210 699 aaPredicted RBP18.83■□□□□ 0.6
NPHP4-210ENST00000506941 BRMS1LQ5PSV4 323 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 GRAMD4Q6IC98 578 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 CHSY1Q86X52 802 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 SYNPOQ8N3V7 929 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 TERB1Q8NA31 727 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 PRSS33Q8NF86 280 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 CENPIQ92674 756 aaPredicted RBP18.83■□□□□ 0.6
NPHP4-210ENST00000506941 TMA16Q96EY4 203 aaKnown RBP18.83■□□□□ 0.6
NPHP4-210ENST00000506941 TKTL2Q9H0I9 626 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 WDCPQ9H6R7 721 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 PARVAQ9NVD7 372 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 CNOT8Q9UFF9 292 aaKnown RBP18.83■□□□□ 0.6
NPHP4-210ENST00000506941 CACNA1HO95180 2353 aa18.83■□□□□ 0.6
NPHP4-210ENST00000506941 SSU72P8A0A1W2PR75 194 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 CCP110O43303 1012 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 TBL1XO60907 577 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 GGCXP38435 758 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 DGKGP49619 791 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 ZNF143P52747 638 aaPredicted RBP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 SEC13P55735 322 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 HDAC4P56524 1084 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 TSR1Q2NL82 804 aaKnown RBP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 CCDC122Q5T0U0 273 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 ALKBH5Q6P6C2 394 aaKnown RBP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 SND1Q7KZF4 910 aaKnown RBP eCLIP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 FAM131BQ86XD5 332 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 MAML2Q8IZL2 1156 aaPredicted RBP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 LGI2Q8N0V4 545 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 CFAP52Q8N1V2 620 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 HJURPQ8NCD3 748 aaPredicted RBP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 WFDC5Q8TCV5 224 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 FAM172AQ8WUF8 416 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 DDX50Q9BQ39 737 aaKnown RBP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 IRX2Q9BZI1 471 aaPredicted RBP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 TRIM7Q9C029 511 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 SPATA6Q9NWH7 488 aaPredicted RBP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 ZNHIT6Q9NWK9 470 aaKnown RBP18.82■□□□□ 0.6
NPHP4-210ENST00000506941 SLC12A6Q9UHW9 1150 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 SNX10Q9Y5X0 201 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms