RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 EIF4HQ15056 248 aaKnown RBP17.3■□□□□ 0.36
SNCA-209ENST00000506244 C2CD6Q53TS8 623 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 TDRD12Q587J7 1177 aaKnown RBP17.3■□□□□ 0.36
SNCA-209ENST00000506244 BRMS1LQ5PSV4 323 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 PIK3R6Q5UE93 754 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 TTC39BQ5VTQ0 682 aaPredicted RBP17.3■□□□□ 0.36
SNCA-209ENST00000506244 PKN3Q6P5Z2 889 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 CAMKK1Q8N5S9 505 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 ZNF513Q8N8E2 541 aaPredicted RBP17.3■□□□□ 0.36
SNCA-209ENST00000506244 WFIKKN2Q8TEU8 576 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 UCMAQ8WVF2 138 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 NELL1Q92832 810 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 NT5C3BQ969T7 300 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 SYT11Q9BT88 431 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 SELENOOQ9BVL4 669 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 HAUS4Q9H6D7 363 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 FAM86C1Q9NVL1 165 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 TMEM59LQ9UK28 342 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 CAPN11Q9UMQ6 739 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 STARD13Q9Y3M8 1113 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 FAM170AA1A519 330 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 K7ESF4 209 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 NPC1O15118 1278 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 TBL1XO60907 577 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 TDGF1P13385 188 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 SDC4P31431 198 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 SLC6A4P31645 630 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 RDXP35241 583 aaKnown RBP17.29■□□□□ 0.36
SNCA-209ENST00000506244 TIE1P35590 1138 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 FLT3P36888 993 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 KIR2DL1P43626 348 aaPredicted RBP17.29■□□□□ 0.36
SNCA-209ENST00000506244 DEUP1Q05D60 604 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 MESP2Q0VG99 397 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 MS4A13Q5J8X5 152 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 RABGAP1LQ5R372 815 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 SPECC1LQ69YQ0 1117 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 NADSYN1Q6IA69 706 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 ACAD10Q6JQN1 1059 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 DNAJC24Q6P3W2 148 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 RFWD3Q6PCD5 774 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 TSSK4Q6SA08 328 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 VCPIP1Q96JH7 1222 aa17.29■□□□□ 0.36
SNCA-209ENST00000506244 CCDC163A0A0D9SF12 145 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 KLF8O95600 359 aaPredicted RBP17.28■□□□□ 0.36
SNCA-209ENST00000506244 APBB3O95704 486 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 GYPCP04921 128 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 CISD3P0C7P0 127 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 KRT3P12035 628 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 TACR2P21452 398 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 DGKEP52429 567 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 PTP4A2Q12974 167 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 CDH18Q13634 790 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 OTUD1Q5VV17 481 aaPredicted RBP17.28■□□□□ 0.36
SNCA-209ENST00000506244 E4F1Q66K89 784 aaPredicted RBP17.28■□□□□ 0.36
SNCA-209ENST00000506244 RAP1GAP2Q684P5 730 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 RNF43Q68DV7 783 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 SDE2Q6IQ49 451 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 LONP2Q86WA8 852 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 MFN1Q8IWA4 741 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 ALLCQ8N6M5 410 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 IL17RCQ8NAC3 791 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 ZBTB44Q8NCP5 570 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 TSTD1Q8NFU3 115 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 TRIM11Q96F44 468 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 PRICKLE1Q96MT3 831 aaPredicted RBP17.28■□□□□ 0.36
SNCA-209ENST00000506244 TBCBQ99426 244 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 WDCPQ9H6R7 721 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 PIGVQ9NUD9 493 aa17.28■□□□□ 0.36
SNCA-209ENST00000506244 FANCMQ8IYD8 2048 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 GOLGA6L7A0A1B0GV03 622 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 PROB1E7EW31 1015 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 TRIM24O15164 1050 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 ALDH1A2O94788 518 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 SERPING1P05155 500 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 GZMAP12544 262 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 PDGFRAP16234 1089 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 CNR2P34972 360 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 PTPN9P43378 593 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 CXCR3P49682 368 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 ZNF571Q7Z3V5 609 aaPredicted RBP17.27■□□□□ 0.36
SNCA-209ENST00000506244 SFTPA1Q8IWL2 248 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 CHPFQ8IZ52 775 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 MCOLN2Q8IZK6 566 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 LGI2Q8N0V4 545 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 AHI1Q8N157 1196 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.27■□□□□ 0.36
SNCA-209ENST00000506244 TXNDC5Q8NBS9 432 aaKnown RBP17.27■□□□□ 0.36
SNCA-209ENST00000506244 CPLX3Q8WVH0 158 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 NKD2Q969F2 451 aaPredicted RBP17.27■□□□□ 0.36
SNCA-209ENST00000506244 CFAP57Q96MR6 1250 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 POLMQ9NP87 494 aaPredicted RBP17.27■□□□□ 0.36
SNCA-209ENST00000506244 ARHGEF38Q9NXL2 777 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 GGA2Q9UJY4 613 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 R4GN57 208 aa17.27■□□□□ 0.36
SNCA-209ENST00000506244 A0A1B0GVM2 712 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 TCAF2A6NFQ2 919 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 C2CD4BA6NLJ0 364 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 SIGLEC16A6NMB1 481 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 TIMM44O43615 452 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 HNRNPLP14866 589 aaKnown RBP eCLIP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms