RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 BBS2Q9BXC9 721 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 ZMYND12Q9H0C1 365 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CDH19Q9H159 772 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CDT1Q9H211 546 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 GSX1Q9H4S2 264 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 ANKEF1Q9NU02 776 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 EHD2Q9NZN4 543 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 FOXJ2Q9P0K8 574 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 MARK1Q9P0L2 795 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 SCML1Q9UN30 329 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 SLC27A6Q9Y2P4 619 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 LOXL2Q9Y4K0 774 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 SNX14Q9Y5W7 946 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 MED13Q9UHV7 2174 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 PTPRJQ12913 1337 aa4.46□□□□□ -1.69
CPNE4-204ENST00000505331 CYP3A7-CYP3A51PA0A087WV96 503 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 SYCE3A1L190 88 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 C10orf142B7Z368 130 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 C9orf172C9J069 976 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 K7ESM1 405 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 NKX2-8O15522 239 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CTIFO43310 598 aaKnown RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 XPOTO43592 962 aaKnown RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 EDIL3O43854 480 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 NEMFO60524 1076 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 PIAS2O75928 621 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CBX6O95503 412 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 OAS1P00973 400 aaKnown RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 MCF2P10911 925 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 HGFP14210 728 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 COX6B1P14854 86 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 SDSP20132 328 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CYP3A7P24462 503 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CYP2F1P24903 491 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CCKBRP32239 447 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 NAMPTP43490 491 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 ART1P52961 327 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 ANTXR2P58335 489 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 RPS14P62263 151 aaKnown RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 PPP2R2AP63151 447 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 TSPY1Q01534 308 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CDC20Q12834 499 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 ADAM9Q13443 819 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 KCNJ12Q14500 433 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 ZNF234Q14588 700 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 EIF4HQ15056 248 aaKnown RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 DEFB109BQ30KR1 87 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 ZNF568Q3ZCX4 644 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 DNTTIP2Q5QJE6 756 aaKnown RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 RNF20Q5VTR2 975 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 NCEH1Q6PIU2 408 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CRTC1Q6UUV9 634 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 SERPINA13PQ6UXR4 307 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 TGIF2LYQ8IUE0 185 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 ADGRF2Q8IZF7 708 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 AHI1Q8N157 1196 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 IL22RA1Q8N6P7 574 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CHDHQ8NE62 594 aaPredicted RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 MCPH1Q8NEM0 835 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 OR2T34Q8NGX1 318 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 BICD2Q8TD16 824 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CCDC12Q8WUD4 166 aaPredicted RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 JPH3Q8WXH2 748 aaPredicted RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 USP7Q93009 1102 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 NAT6Q93015 286 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 ZNF775Q96BV0 537 aaPredicted RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 P2RY11Q96G91 374 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 TMX3Q96JJ7 454 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 SLC45A3Q96JT2 553 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 SLITRK1Q96PX8 696 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 TRIM8Q9BZR9 551 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 INTS2Q9H0H0 1204 aaKnown RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 PLEKHA5Q9HAU0 1116 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 ANO2Q9NQ90 1003 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 TMLHEQ9NVH6 421 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 KLHL11Q9NVR0 708 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 RGL1Q9NZL6 768 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 TMEM63CQ9P1W3 806 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 FBXO10Q9UK96 956 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 VAV3Q9UKW4 847 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 UBQLN1Q9UMX0 589 aaKnown RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 KCTD3Q9Y597 815 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 PCDHA5Q9Y5H7 936 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 KLF2Q9Y5W3 355 aaPredicted RBP4.46□□□□□ -1.7
CPNE4-204ENST00000505331 SLC12A7Q9Y666 1083 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 CNTNAP5Q8WYK1 1306 aa4.46□□□□□ -1.7
CPNE4-204ENST00000505331 MYLKQ15746 1914 aa4.45□□□□□ -1.7
CPNE4-204ENST00000505331 CEP192Q8TEP8 1941 aa4.45□□□□□ -1.7
CPNE4-204ENST00000505331 NBASA2RRP1 2371 aa4.45□□□□□ -1.7
CPNE4-204ENST00000505331 A0A0B4J269 797 aa4.45□□□□□ -1.7
CPNE4-204ENST00000505331 CCDC66A2RUB6 948 aa4.45□□□□□ -1.7
CPNE4-204ENST00000505331 KIF2AO00139 706 aaPredicted RBP4.45□□□□□ -1.7
CPNE4-204ENST00000505331 NTN3O00634 580 aaPredicted RBP4.45□□□□□ -1.7
CPNE4-204ENST00000505331 ADAMTS3O15072 1205 aa4.45□□□□□ -1.7
CPNE4-204ENST00000505331 TIMM44O43615 452 aa4.45□□□□□ -1.7
CPNE4-204ENST00000505331 SIX3O95343 332 aaPredicted RBP4.45□□□□□ -1.7
CPNE4-204ENST00000505331 LYPLA2O95372 231 aa4.45□□□□□ -1.7
CPNE4-204ENST00000505331 ABL1P00519 1130 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms