RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PROM1O43490 865 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 TOX4O94842 621 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 REC8O95072 547 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 POMCP01189 267 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 AMHP03971 560 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 URODP06132 367 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 ATXN1LP0C7T5 689 aaKnown RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SPATA31C1P0DKV0 1188 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 PNLIPP16233 465 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 HOXB4P17483 251 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 LRPAP1P30533 357 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 CIITAP33076 1130 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 TRHRP34981 398 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 KIR2DL3P43628 341 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 PXNP49023 591 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 PTTG1IPP53801 180 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 RCAN1P53805 252 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 MFAP4P55083 255 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 HDAC4P56524 1084 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 OLR1P78380 273 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 ADAM17P78536 824 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZP2Q05996 745 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SCN1BQ07699 218 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 C17orf67Q0P5P2 114 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 KIAA2012Q0VF49 1180 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 PTK6Q13882 451 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 NR1I3Q14994 352 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 TNIP1Q15025 636 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SF3B3Q15393 1217 aaKnown RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 LETM2Q2VYF4 491 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 IGSF11Q5DX21 431 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZNF766Q5HY98 468 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMEM196Q5HYL7 178 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 UBAP2Q5T6F2 1119 aaKnown RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 OTUD7BQ6GQQ9 843 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 CDC73Q6P1J9 531 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 LINC00114Q6XXX2 140 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 PLPPR4Q7Z2D5 763 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 CLEC14AQ86T13 490 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 VSIG10LQ86VR7 867 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 MON1AQ86VX9 555 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SIX6OS1Q8N1H7 587 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SYNE4Q8N205 404 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 FITM2Q8N6M3 262 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 PDPRQ8NCN5 879 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 PDZD8Q8NEN9 1154 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 MAFAQ8NHW3 353 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC16A10Q8TF71 515 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMEM171Q8WVE6 324 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 KCNJ9Q92806 393 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 TSPAN17Q96FV3 270 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 CEP95Q96GE4 821 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZNF668Q96K58 619 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 KLHL15Q96M94 604 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 PWWP2AQ96N64 755 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 WDFY2Q96P53 400 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 NR1H4Q96RI1 486 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SMOQ99835 787 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 NUDT22Q9BRQ3 303 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 CCDC106Q9BWC9 280 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SYNPO2LQ9H987 977 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 LTB4R2Q9NPC1 389 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 MRPS18AQ9NVS2 196 aaKnown RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 TRMT1Q9NXH9 659 aaKnown RBP3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 MPP6Q9NZW5 540 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 DNAJB9Q9UBS3 223 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 NENFQ9UMX5 172 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 RAD54BQ9Y620 910 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SESN1Q9Y6P5 492 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 AP1M2Q9Y6Q5 423 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SYCE3A1L190 88 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 OR2W5A6NFC9 320 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 GAGE10A6NGK3 116 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 GLOD5A6NK44 160 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 CXorf49A8MYA2 514 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 M0QYT0 321 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 KLHL18O94889 574 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 HEXIM1O94992 359 aaKnown RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 CFIP05156 583 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 TPOP07202 933 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 SNRPA1P09661 255 aaKnown RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ACP5P13686 325 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 CHN1P15882 459 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ERCC2P18074 760 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 PTAFRP25105 342 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 RBL1P28749 1068 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 TCF7P36402 384 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 CD96P40200 585 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 PRPHP41219 470 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 PRKCIP41743 596 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 TXKP42681 527 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC15A1P46059 708 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 GATMP50440 423 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 LIMK1P53667 647 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 BPIFB4P59827 614 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 DDR1Q08345 913 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLFN5Q08AF3 891 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 NFIAQ12857 509 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 BNIP3Q12983 259 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 AIMP2Q13155 320 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms