RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TRIM5Q9C035 493 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 DEF6Q9H4E7 631 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 GRPEL1Q9HAV7 217 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 ACP6Q9NPH0 428 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 PRMT8Q9NR22 394 aaPredicted RBP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 KIAA1522Q9P206 1035 aaPredicted RBP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 SUN2Q9UH99 717 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 MUC3AQ02505 3323 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 ZNF318Q5VUA4 2279 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 SSU72P8A0A1W2PR75 194 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 PROB1E7EW31 1015 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 PIK3R2O00459 728 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 MDM4O15151 490 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 RNF40O75150 1001 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 CLDN11O75508 207 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 ENDOD1O94919 500 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 LUC7L3O95232 432 aaKnown RBP10.21□□□□□ -0.77
NR1I3-220ENST00000505005 KLKB1P03952 638 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 FYNP06241 537 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 PDGFRAP16234 1089 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 NTSR1P30989 418 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 SOX9P48436 509 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 CXCR3P49682 368 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 KLK7P49862 253 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 SULT1E1P49888 294 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 VCPP55072 806 aaKnown RBP10.21□□□□□ -0.77
NR1I3-220ENST00000505005 RNASE9P60153 205 aaKnown RBP10.21□□□□□ -0.77
NR1I3-220ENST00000505005 ST8SIA6P61647 398 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 FZD5Q13467 585 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 EIF4EBP2Q13542 120 aaPredicted RBP10.21□□□□□ -0.77
NR1I3-220ENST00000505005 CDH18Q13634 790 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 PIK3R6Q5UE93 754 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 FYB2Q5VWT5 728 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 FSTL4Q6MZW2 842 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 DNAJC24Q6P3W2 148 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 TXNDC11Q6PKC3 985 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 METTL3Q86U44 580 aaKnown RBP10.21□□□□□ -0.77
NR1I3-220ENST00000505005 LONP2Q86WA8 852 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 GAS2L3Q86XJ1 694 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 FIBINQ8TAL6 211 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 TTC8Q8TAM2 541 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 FNIP1Q8TF40 1166 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.21□□□□□ -0.77
NR1I3-220ENST00000505005 XPO4Q9C0E2 1151 aaKnown RBP10.21□□□□□ -0.77
NR1I3-220ENST00000505005 TTYH3Q9C0H2 523 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 HAUS4Q9H6D7 363 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 EBF1Q9UH73 591 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 CYTH4Q9UIA0 394 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 TMEM59LQ9UK28 342 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 AJAP1Q9UKB5 411 aaPredicted RBP10.21□□□□□ -0.77
NR1I3-220ENST00000505005 MMP17Q9ULZ9 603 aa10.21□□□□□ -0.77
NR1I3-220ENST00000505005 COL4A2P08572 1712 aa10.21□□□□□ -0.78
NR1I3-220ENST00000505005 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 A0A1B0GVM2 712 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 TCAF2A6NFQ2 919 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 H0Y626 953 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 EPHB6O15197 1021 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 ZNF217O75362 1048 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 IPO7O95373 1038 aaKnown RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 APBB3O95704 486 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 PNMA6AP0CW24 399 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 POLR2EP19388 210 aaKnown RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 GPD1P21695 349 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 NBL1P41271 181 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 PGFP49763 221 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 ZNF143P52747 638 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 CDH4P55283 916 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 NRG1Q02297 640 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 CSTF1Q05048 431 aaKnown RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 CCDC15Q0P6D6 951 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 MTAPQ13126 283 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 NME3Q13232 169 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 ZNF177Q13360 481 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 USP39Q53GS9 565 aaKnown RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 MS4A13Q5J8X5 152 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 SPDYCQ5MJ68 293 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 SYPL2Q5VXT5 272 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 ZNF783Q6ZMS7 281 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 MMS22LQ6ZRQ5 1243 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 CHST9Q7L1S5 443 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 TAC4Q86UU9 113 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 CHSY1Q86X52 802 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 PSTKQ8IV42 348 aaKnown RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 MFN1Q8IWA4 741 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 KMT2EQ8IZD2 1858 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 MCOLN2Q8IZK6 566 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 ZNF513Q8N8E2 541 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 RIN3Q8TB24 985 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 USP33Q8TEY7 942 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 CLEC4CQ8WTT0 213 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 NDRG1Q92597 394 aaKnown RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 NTAN1Q96AB6 310 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 MRFAP1L1Q96HT8 127 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 FCRL2Q96LA5 508 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 C11orf70Q9BRQ4 267 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 CNPY3Q9BT09 278 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 ISCUQ9H1K1 167 aa10.2□□□□□ -0.78
NR1I3-220ENST00000505005 RYDENQ9NUL5 291 aaKnown RBP10.2□□□□□ -0.78
NR1I3-220ENST00000505005 ARHGEF38Q9NXL2 777 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms