RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MT-CO3P00414 261 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ABL1P00519 1130 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 IGHV4-34P06331 123 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 GP1BAP07359 652 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 GJB2P29033 226 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 EPHA8P29322 1005 aaPredicted RBP6.32□□□□□ -1.4
GYPB-204ENST00000504951 NUDT1P36639 197 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 UBA7P41226 1012 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ARRB1P49407 418 aaPredicted RBP6.32□□□□□ -1.4
GYPB-204ENST00000504951 CCR5P51681 352 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 CYP27A1Q02318 531 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ZNF211Q13398 564 aaPredicted RBP6.32□□□□□ -1.4
GYPB-204ENST00000504951 ALCAMQ13740 583 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 LY6DQ14210 128 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ZNF234Q14588 700 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 DUOXA2Q1HG44 320 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 LINC01559Q495D7 138 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ARHGAP40Q5TG30 622 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ATG14Q6ZNE5 492 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ANKS1BQ7Z6G8 1248 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 FAM217AQ8IXS0 508 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 CPXM2Q8N436 756 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 KDM1BQ8NB78 822 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 FAM174AQ8TBP5 190 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 KCNE4Q8WWG9 221 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 RAD54LQ92698 747 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 WBP2Q969T9 261 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ANKRD36BP1Q96IX9 119 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 EPSTI1Q96J88 318 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 MMS19Q96T76 1030 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 B3GNT5Q9BYG0 378 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 FGFBP2Q9BYJ0 223 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 DCLK3Q9C098 648 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 LHX5Q9H2C1 402 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 CCSER2Q9H7U1 834 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 POLR1BQ9H9Y6 1135 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 USP29Q9HBJ7 922 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 PNPLA8Q9NP80 782 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ASCL3Q9NQ33 180 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 GDF3Q9NR23 364 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 TLR8Q9NR97 1041 aaKnown RBP6.32□□□□□ -1.4
GYPB-204ENST00000504951 THSD1Q9NS62 852 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 ANKMY1Q9P2S6 941 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 SCML2Q9UQR0 700 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 SPTAN1Q13813 2472 aaKnown RBP6.32□□□□□ -1.4
GYPB-204ENST00000504951 ATP8B3O60423 1300 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 NUMA1Q14980 2115 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 NOTCH2Q04721 2471 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 TMEM131Q92545 1883 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 H3BQV1 296 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 KCNK3O14649 394 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 MAGEC1O60732 1142 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 ITGB2P05107 769 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 KRT18P05783 430 aaKnown RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 PDGFRBP09619 1106 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 TIMP2P16035 220 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 ITGB6P18564 788 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 ABCB4P21439 1286 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 CD38P28907 300 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 ATICP31939 592 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 DDIT3P35638 169 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 CASP5P51878 434 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 SLC5A3P53794 718 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 CACNA2D1P54289 1103 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 C21orf59P57076 290 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 WDR4P57081 412 aaKnown RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 ZNF445P59923 1031 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 PSMC1P62191 440 aaKnown RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 RPS14P62263 151 aaKnown RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 COG7P83436 770 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 DNAJC3Q13217 504 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 UBAP2LQ14157 1087 aaKnown RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 GEN1Q17RS7 908 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 MDH1BQ5I0G3 518 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 L1TD1Q5T7N2 865 aaKnown RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 KIAA0895LQ68EN5 471 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 TPGS1Q6ZTW0 290 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 PAQR9Q6ZVX9 377 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 TADA2BQ86TJ2 420 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 SFR1Q86XK3 245 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 WDR49Q8IV35 697 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.31□□□□□ -1.4
GYPB-204ENST00000504951 MFSD2AQ8NA29 543 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 B3GALNT2Q8NCR0 500 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 WFIKKN2Q8TEU8 576 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 SAAL1Q96ER3 474 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 CALML4Q96GE6 196 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 SLC46A1Q96NT5 459 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 ACCSQ96QU6 501 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 CDK5RAP1Q96SZ6 601 aaKnown RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 FAM213AQ9BRX8 229 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 ZNF518BQ9C0D4 1074 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 SNX25Q9H3E2 840 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 CPNE5Q9HCH3 593 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 KIAA1586Q9HCI6 787 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 DMAP1Q9NPF5 467 aaPredicted RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 OLFML3Q9NRN5 406 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 RBAKQ9NYW8 714 aaPredicted RBP6.31□□□□□ -1.4
GYPB-204ENST00000504951 CLIC5Q9NZA1 410 aa6.31□□□□□ -1.4
GYPB-204ENST00000504951 TBC1D7Q9P0N9 293 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms