RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 CLK3P49761 638 aaKnown RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 FLT3LGP49771 235 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 TUBP50607 506 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 UBE3AQ05086 875 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 GRIN1Q05586 938 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 RAB32Q13637 225 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 TAF11Q15544 211 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 WHAMMP3Q1A5X7 153 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 TTC31Q49AM3 519 aaPredicted RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 FILIP1LQ4L180 1135 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 FLYWCH1Q4VC44 716 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 SPECC1LQ69YQ0 1117 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 USP17L6PQ6QN14 398 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 FAM43BQ6ZT52 329 aaPredicted RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 ZNF589Q86UQ0 364 aaPredicted RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 KRT73Q86Y46 540 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 VGLL2Q8N8G2 317 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 TRIML1Q8N9V2 468 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 KBTBD3Q8NAB2 608 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 MLKLQ8NB16 471 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 KCNH5Q8NCM2 988 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 STYXQ8WUJ0 223 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 UCMAQ8WVF2 138 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 WASF1Q92558 559 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 SMARCE1Q969G3 411 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 CCDC51Q96ER9 411 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 FDXACB1Q9BRP7 624 aaPredicted RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 UTP14AQ9BVJ6 771 aaKnown RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 BTBD2Q9BX70 525 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 AMNQ9BXJ7 453 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 AGXT2Q9BYV1 514 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 OSBPL6Q9BZF3 934 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 SIL1Q9H173 461 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 MRPL46Q9H2W6 279 aaKnown RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 BICC1Q9H694 974 aaKnown RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 SMURF2Q9HAU4 748 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 GJB4Q9NTQ9 266 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.47□□□□□ -1.69
RFC1-208ENST00000504849 SIDT1Q9NXL6 827 aaKnown RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 GALNT8Q9NY28 637 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 RSPH14Q9UHP6 348 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 TUBE1Q9UJT0 475 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 FEM1BQ9UK73 627 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 ITGB1BP2Q9UKP3 347 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 ZDHHC8Q9ULC8 765 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 PA2G4Q9UQ80 394 aaKnown RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 RRP15Q9Y3B9 282 aaKnown RBP4.47□□□□□ -1.69
RFC1-208ENST00000504849 PCDHA1Q9Y5I3 950 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 COL15A1P39059 1388 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 ADAMTS13Q76LX8 1427 aa4.46□□□□□ -1.69
RFC1-208ENST00000504849 CACNA1FO60840 1977 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 USP54Q70EL1 1684 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 PLEKHG2Q9H7P9 1386 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 FAM237AA0A1B0GTK4 181 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 GRID2IPA4D2P6 1211 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 CTAGE9A4FU28 777 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 VWA3AA6NCI4 1184 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 MBD3L4A6NDZ8 208 aaPredicted RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 MBD3L3A6NE82 208 aaPredicted RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 VGLL3A8MV65 326 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 AKR1B15C9JRZ8 316 aaPredicted RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 E7EWF7 191 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 MYO1CO00159 1063 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 RNMTO43148 476 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 DAPK3O43293 454 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 USO1O60763 962 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 TMEM127O75204 238 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 TIPRLO75663 272 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 ZFYP08048 801 aaPredicted RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 LTA4HP09960 611 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 CAPN2P17655 700 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 KLRC1P26715 233 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 KRT20P35900 424 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 MAGEA9P43362 315 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 SLC6A9P48067 706 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 CARSP49589 748 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 GTF2A1P52655 376 aaPredicted RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 DRG2P55039 364 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 SOX8P57073 446 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 KRT83P78385 493 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 ROR1Q01973 937 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 CKAP4Q07065 602 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 MGAT5Q09328 741 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 MAP3K12Q12852 859 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 TRDNQ13061 729 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 SLC13A2Q13183 592 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 TOP3AQ13472 1001 aaPredicted RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 HABP2Q14520 560 aaPredicted RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 SLC39A14Q15043 492 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 MAN2A1Q16706 1144 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 IMMTQ16891 758 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 MST1LQ2TV78 715 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 C19orf54Q5BKX5 351 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 CD276Q5ZPR3 534 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 FAM205BPQ63HN1 556 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 TRIM65Q6PJ69 517 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 KLHL17Q6TDP4 642 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 RINLQ6ZS11 566 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 KRT28Q7Z3Y7 464 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms