RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ACSL6Q9UKU0 697 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 CLCA1A8K7I4 914 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 SLC16A6O15403 523 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 NOL3O60936 208 aaKnown RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 AKR7A3O95154 331 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 UNC5CO95185 931 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF205O95201 554 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PDGFBP01127 241 aaPredicted RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 NTSR1P30989 418 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 MCM7P33993 719 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 MAGEA4P43358 317 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PREPP48147 710 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 SLC11A2P49281 568 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 HNRNPUQ00839 825 aaKnown RBP eCLIP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 CHIT1Q13231 466 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 CYP2A13Q16696 494 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 CENPPQ6IPU0 288 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 TMPRSS7Q7RTY8 843 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 TXNRD3Q86VQ6 643 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PROSER1Q86XN7 944 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 SIX6OS1Q8N1H7 587 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 KDM1BQ8NB78 822 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 DENND6BQ8NEG7 585 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 OR52E1Q8NGJ3 308 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 OR6Y1Q8NGX8 325 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ZC3H10Q96K80 434 aaKnown RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 DBNDD2Q9BQY9 259 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ABCG8Q9H221 673 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF552Q9H707 407 aaPredicted RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 EVA1AQ9H8M9 152 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 SERHLQ9NQF3 203 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 APPL1Q9UKG1 709 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 GSAPA4D1B5 854 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 N4BP3O15049 544 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PLSCR1O15162 318 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 CNPP09543 421 aaKnown RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 IL1R2P27930 398 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ETV1P50549 477 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 CTAG1AP78358 180 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 RALGDSQ12967 914 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ARHGEF6Q15052 776 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 MEP1BQ16820 701 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 AADACL4Q5VUY2 407 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 TLK2Q86UE8 772 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 FAM90A1Q86YD7 464 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ASB11Q8WXH4 323 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 KCNN1Q92952 543 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ZKSCAN4Q969J2 545 aaPredicted RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 C19orf43Q9BQ61 176 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PIMREGQ9BSJ6 248 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ZSCAN32Q9NX65 697 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 TMOD2Q9NZR1 351 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 BTBD7Q9P203 1132 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF263O14978 683 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 POLR3GO15318 223 aaPredicted RBP5.46□□□□□ -1.53
NIPBL-204ENST00000504430 ONECUT2O95948 504 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 KLKB1P03952 638 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 GAAP10253 952 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 FNTBP49356 437 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 CAPSQ13938 189 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 CCDC40Q4G0X9 1142 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 ANKS1BQ7Z6G8 1248 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 POU5F2Q8N7G0 328 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 MAFAQ8NHW3 353 aaPredicted RBP5.46□□□□□ -1.53
NIPBL-204ENST00000504430 URGCPQ8TCY9 931 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 MRPL38Q96DV4 380 aaKnown RBP5.46□□□□□ -1.53
NIPBL-204ENST00000504430 SPACA9Q96E40 222 aaPredicted RBP5.46□□□□□ -1.53
NIPBL-204ENST00000504430 SNX27Q96L92 541 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF341Q9BYN7 854 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 CPEB1Q9BZB8 566 aaKnown RBP5.46□□□□□ -1.53
NIPBL-204ENST00000504430 PDCL3Q9H2J4 239 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 SLC32A1Q9H598 525 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 MRPL44Q9H9J2 332 aaKnown RBP5.46□□□□□ -1.53
NIPBL-204ENST00000504430 A1CFQ9NQ94 594 aaKnown RBP5.46□□□□□ -1.53
NIPBL-204ENST00000504430 GRID1Q9ULK0 1009 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 CAB39Q9Y376 341 aaPredicted RBP5.46□□□□□ -1.53
NIPBL-204ENST00000504430 ACTL7AQ9Y615 435 aa5.46□□□□□ -1.53
NIPBL-204ENST00000504430 A0A0A6YYK5 440 aaPredicted RBP5.46□□□□□ -1.54
NIPBL-204ENST00000504430 ARP10275 920 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 FDPSP14324 419 aaKnown RBP5.46□□□□□ -1.54
NIPBL-204ENST00000504430 MCM3P25205 808 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 IL13P35225 146 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 IRAK1P51617 712 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 PMS2P54278 862 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 CARD18P57730 90 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 NFIAQ12857 509 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 CEBPEQ15744 281 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 UTP14CQ5TAP6 766 aaKnown RBP5.46□□□□□ -1.54
NIPBL-204ENST00000504430 CHST9Q7L1S5 443 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 CUZD1Q86UP6 607 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 TRIM74Q86UV6 250 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 TRIM73Q86UV7 250 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 KBTBD6Q86V97 674 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 POC5Q8NA72 575 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 SLC13A3Q8WWT9 602 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 ZBTB9Q96C00 473 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 ZNF653Q96CK0 615 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 SOX7Q9BT81 388 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 DUSP23Q9BVJ7 150 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms