RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 CLOCKO15516 846 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 TPBGLP0DKB5 382 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 RAB5BP61020 215 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 SPATA17Q96L03 361 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 SIAEQ9HAT2 523 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 ZNHIT2Q9UHR6 403 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 SNX24Q9Y343 169 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 RIMS1Q86UR5 1692 aaKnown RBP6.22□□□□□ -1.41
LINC02397-201ENST00000504409 DPPA5A6NC42 116 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 CHADO15335 359 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 GRIA1P42261 906 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 PRKCQQ04759 706 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 DGKDQ16760 1214 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 TEX47Q8TBZ9 253 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 ZHX1-C8orf76Q96EF9 292 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 ELMO2Q96JJ3 720 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 AGPAT1Q99943 283 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 C12orf4Q9NQ89 552 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 KIAA1257Q9ULG3 409 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 hCG_2014768A0A024R1R8 64 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 F6X3S4 739 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 TEX28O15482 410 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 HUS1O60921 280 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 COL6A2P12110 1019 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 RAG1P15918 1043 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF24P17028 368 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 GARTP22102 1010 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 IREB2P48200 963 aaKnown RBP6.22□□□□□ -1.41
LINC02397-201ENST00000504409 CD81P60033 236 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 PTP4A2Q12974 167 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 LSAMPQ13449 338 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 SMIM5Q71RC9 77 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 SPATA6LQ8N4H0 392 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 MDM1Q8TC05 714 aa6.22□□□□□ -1.41
LINC02397-201ENST00000504409 DNAJA4Q8WW22 397 aaPredicted RBP6.22□□□□□ -1.41
LINC02397-201ENST00000504409 ZC3H7BQ9UGR2 993 aaKnown RBP6.22□□□□□ -1.41
LINC02397-201ENST00000504409 CYP27B1O15528 508 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 HPRP00739 348 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 CYP11B2P19099 503 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF827Q17R98 1081 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 CCNYL2Q5T2Q4 361 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 MTDHQ86UE4 582 aaKnown RBP6.21□□□□□ -1.41
LINC02397-201ENST00000504409 CARNMT1Q8N4J0 409 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 EYA1Q99502 592 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 ZDHHC7Q9NXF8 308 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 TELO2Q9Y4R8 837 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 SLCO1A2P46721 670 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF772Q68DY9 489 aaPredicted RBP6.21□□□□□ -1.41
LINC02397-201ENST00000504409 DCP2Q8IU60 420 aaKnown RBP6.21□□□□□ -1.41
LINC02397-201ENST00000504409 IFNL3Q8IZI9 196 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 PGAM4Q8N0Y7 254 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 EMC1Q8N766 993 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 MAGEB6Q8N7X4 407 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 KLHL6Q8WZ60 621 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 VAT1Q99536 393 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 INTS10Q9NVR2 710 aaKnown RBP6.21□□□□□ -1.41
LINC02397-201ENST00000504409 ABCG2Q9UNQ0 655 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 A0A087X1B8 175 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 GPR75-ASB3A0A0A6YYF3 556 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 AMPD1P23109 780 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 MNDAP41218 407 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 BRMS1LQ5PSV4 323 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 CIAPIN1Q6FI81 312 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 TCEAL6Q6IPX3 200 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 COPS6Q7L5N1 327 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 NUDT12Q9BQG2 462 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 DNAJC11Q9NVH1 559 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 ASB3Q9Y575 518 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 MAP3K19Q56UN5 1328 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 MYPNQ86TC9 1320 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 DISP2A7MBM2 1401 aa6.21□□□□□ -1.41
LINC02397-201ENST00000504409 A0A1B0GVI7 797 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 AP3D1O14617 1153 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 EXTL3O43909 919 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 TOM1O60784 492 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 ZMYND10O75800 440 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 S100A8P05109 93 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 CYP21A2P08686 494 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 NUDT2P50583 147 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 ARSEP51690 589 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 SEC24CP53992 1094 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 GTF2IP78347 998 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 PRKG1Q13976 671 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 CLEC4GQ6UXB4 293 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 SNX32Q86XE0 403 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 CCDC60Q8IWA6 550 aaPredicted RBP6.21□□□□□ -1.42
LINC02397-201ENST00000504409 DEPTORQ8TB45 409 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 HAVCR2Q8TDQ0 301 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 CRELD1Q96HD1 420 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 TRIM9Q9C026 710 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 CD93Q9NPY3 652 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 CYLDQ9NQC7 956 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 MTMR10Q9NXD2 777 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 RGSL1A5PLK6 1076 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 SAGP10523 405 aaPredicted RBP6.21□□□□□ -1.42
LINC02397-201ENST00000504409 BMP1P13497 986 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 NPR2P20594 1047 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 RPL4P36578 427 aaKnown RBP6.21□□□□□ -1.42
LINC02397-201ENST00000504409 GMPRP36959 345 aa6.21□□□□□ -1.42
LINC02397-201ENST00000504409 MAGEA6P43360 314 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms