RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HLA-FP30511 346 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 PPP1R2P41236 205 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 WASP42768 502 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 FKBP3Q00688 224 aaKnown RBP6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 BNC1Q01954 994 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 LRRC63Q05C16 580 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 SCAPQ12770 1279 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 EFEMP1Q12805 493 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 TEAD4Q15561 434 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 PTPRNQ16849 979 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 HLA-BQ31612 363 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 TTC31Q49AM3 519 aaPredicted RBP6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 SGO2Q562F6 1265 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 BSPRYQ5W0U4 402 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 LCLAT1Q6UWP7 414 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 KIAA1324Q6UXG2 1013 aaKnown RBP6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 SERPINA13PQ6UXR4 307 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 RSRC2Q7L4I2 434 aaKnown RBP6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 ELOA2Q8IYF1 753 aaPredicted RBP6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 GRAMD1CQ8IYS0 662 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 CHCHD4Q8N4Q1 142 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 FIBINQ8TAL6 211 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 SPATA20Q8TB22 786 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 DDI1Q8WTU0 396 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 SLC35F5Q8WV83 523 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 SEMA4DQ92854 862 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 IGSF8Q969P0 613 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 JAKMIP2Q96AA8 810 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 TTC17Q96AE7 1141 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 FAM131CQ96AQ9 280 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 TMA16Q96EY4 203 aaKnown RBP6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 HSFY1Q96LI6 401 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 SPATA32Q96LK8 384 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 GSDMAQ96QA5 445 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 DDX50Q9BQ39 737 aaKnown RBP6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 BTBD1Q9H0C5 482 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 RSPH9Q9H1X1 276 aaPredicted RBP6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 LHX5Q9H2C1 402 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 GAREM1Q9H706 876 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 CD93Q9NPY3 652 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 RMND1Q9NWS8 449 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 TOR4AQ9NXH8 423 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 PLK2Q9NYY3 685 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 HESX1Q9UBX0 185 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 ADAMTS1Q9UHI8 967 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 NUDT5Q9UKK9 219 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 TSPAN16Q9UKR8 245 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 FZD4Q9ULV1 537 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 PLA2G4CQ9UP65 541 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 AKAP13Q12802 2813 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 CACNA1GO43497 2377 aa6.37□□□□□ -1.39
LSM3P4-201ENST00000502948 PLXNA2O75051 1894 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 FREM2Q5SZK8 3169 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 CABIN1Q9Y6J0 2220 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ITIH6Q6UXX5 1313 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 A0A087WV48 116 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 SLC12A8A0AV02 714 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 TARSL2A2RTX5 802 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 O00370 1275 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 VILLO15195 856 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 SART1O43290 800 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 TNFSF14O43557 240 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 FBXO21O94952 628 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 CLSTN1O94985 981 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ZNF202O95125 648 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 DNTTP04053 509 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 HSP90AA1P07900 732 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 TRIM49P0CI25 452 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 TRIM49CP0CI26 452 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 MAOBP27338 520 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 NUDT1P36639 197 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 CTSKP43235 329 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 GRK6P43250 576 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 SLC11A2P49281 568 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 NDUFA8P51970 172 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 DAOAP59103 153 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 RPS14P62263 151 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 RACK1P63244 317 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 GCNT1Q02742 428 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ARID5AQ03989 594 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 MTA1Q13330 715 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 CAMK2BQ13554 666 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 CUL2Q13617 745 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ACAP1Q15027 740 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 SMAD1Q15797 465 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 CNGA2Q16280 664 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 INAVAQ3KP66 663 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ZNF394Q53GI3 561 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ZNF658Q5TYW1 1059 aaPredicted RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 PIK3R6Q5UE93 754 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 SLCO6A1Q86UG4 719 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 FMNL3Q8IVF7 1028 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 SCUBE3Q8IX30 993 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ZCCHC9Q8N567 271 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 DEFB119Q8N690 84 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 STK32AQ8WU08 396 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 RNF139Q8WU17 664 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 SKA1Q96BD8 255 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 BIRC7Q96CA5 298 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 MYO19Q96H55 970 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms