RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 ADCY2Q08462 1091 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 CBLBQ13191 982 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 PDK1Q15118 436 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 TAF12Q16514 161 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 CA9Q16790 459 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 RAB6CQ53S08 254 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 SLC45A4Q5BKX6 768 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 C10orf120Q5SQS8 335 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 BEND6Q5SZJ8 279 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 HECTD3Q5T447 861 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 NCBP2-AS2Q69YL0 99 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 ADAT2Q7Z6V5 191 aaKnown RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 HOOK3Q86VS8 718 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 KIAA1958Q8N8K9 716 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 POF1BQ8WVV4 589 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 C1orf54Q8WWF1 131 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 ATG4AQ8WYN0 398 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 FATE1Q969F0 183 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 RNF34Q969K3 372 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 ACSF2Q96CM8 615 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 FCRL2Q96LA5 508 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 ZNF512Q96ME7 567 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 OLFM3Q96PB7 478 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 QKIQ96PU8 341 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 RAB6CQ9H0N0 254 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 CATSPERBQ9H7T0 1116 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 ENTPD7Q9NQZ7 604 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 OSER1Q9NX31 292 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 ZDHHC7Q9NXF8 308 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 MARCH2Q9P0N8 246 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 MTRF1LQ9UGC7 380 aaKnown RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 DNPEPQ9ULA0 475 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 ZNF148Q9UQR1 794 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 MYO16Q9Y6X6 1858 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 IGLV3-10A0A075B6K4 115 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 LCHNA4D1U4 455 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 STK10O94804 968 aaKnown RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 SEC31AO94979 1220 aaKnown RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 LRG1P02750 347 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 GOT1P17174 413 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 DNAJB2P25686 324 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 BMP8BP34820 402 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 ACTN2P35609 894 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 CLCN4P51793 760 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 ATXN1P54253 815 aaKnown RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 SLC7A5Q01650 507 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 TWF1Q12792 350 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 IFRD2Q12894 506 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 MTMR3Q13615 1198 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 MORF4L2Q15014 288 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 P3H1Q32P28 736 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 C5orf22Q49AR2 442 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 ASTLQ6HA08 431 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 LRRC31Q6UY01 552 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 GSTA5Q7RTV2 222 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 HDXQ7Z353 690 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 DNAJB7Q7Z6W7 309 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 RELL1Q8IUW5 271 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 HS6ST3Q8IZP7 471 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 KREMEN2Q8NCW0 462 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 CASKIN2Q8WXE0 1202 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 RSAD2Q8WXG1 361 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 ART4Q93070 314 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 TBC1D31Q96DN5 1066 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 CCDC114Q96M63 670 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 PPP1R2P1Q96PQ5 205 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 FMO2Q99518 471 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 VAT1Q99536 393 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 CDCA3Q99618 268 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 GDF15Q99988 308 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 DDX50Q9BQ39 737 aaKnown RBP9.37□□□□□ -0.91
NR1I3-216ENST00000502848 ACBD3Q9H3P7 528 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 ZDHHC18Q9NUE0 388 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 GPATCH2LQ9NWQ4 482 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 GRHL1Q9NZI5 618 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 DTLQ9NZJ0 730 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 ASIC3Q9UHC3 531 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 STOML2Q9UJZ1 356 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 SHOC2Q9UQ13 582 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 NEU3Q9UQ49 428 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 GREB1Q4ZG55 1949 aa9.37□□□□□ -0.91
NR1I3-216ENST00000502848 C5orf60A6NFR6 353 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 DAPK3O43293 454 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 XYLBO75191 536 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 PAGE1O75459 146 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 SOAT2O75908 522 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 LRIG2O94898 1065 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 KRT14P02533 472 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 F11P03951 625 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 C8AP07357 584 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 PECAM1P16284 738 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-216ENST00000502848 ERCC2P18074 760 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 IVDP26440 423 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 EPHB2P29323 1055 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 ECHS1P30084 290 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 MAGEA6P43360 314 aa9.36□□□□□ -0.91
NR1I3-216ENST00000502848 SLC11A2P49281 568 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms