RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 FAM189A1O60320 539 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 KLF8O95600 359 aaPredicted RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 HAPLN1P10915 354 aaPredicted RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 CDC25CP30307 473 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 DEKP35659 375 aaKnown RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 AVPR1AP37288 418 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 OPRD1P41143 372 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 PRPHP41219 470 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 UBA7P41226 1012 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 TUFMP49411 452 aaKnown RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 AARSP49588 968 aaKnown RBP eCLIP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 TAF6P49848 677 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 TMPRSS3P57727 454 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 ATP2C1P98194 919 aaPredicted RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 GRIN1Q05586 938 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 BFSP1Q12934 665 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 BYSLQ13895 437 aaKnown RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 PDGFRLQ15198 375 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 DDR2Q16832 855 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 CCDC142Q17RM4 750 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 GAB4Q2WGN9 574 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 HLA-BQ31612 363 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 TMEM119Q4V9L6 283 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 KIAA1614Q5VZ46 1190 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 WSCD1Q658N2 575 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 SCARA3Q6AZY7 606 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 CC2D1AQ6P1N0 951 aaPredicted RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 SLC39A4Q6P5W5 647 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 SLC36A4Q6YBV0 504 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 DYMQ7RTS9 669 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 TMEM150AQ86TG1 271 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 CPA6Q8N4T0 437 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 EXD3Q8N9H8 876 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 ZSWIM2Q8NEG5 633 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 EXOC4Q96A65 974 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 CALML4Q96GE6 196 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 ZNF419Q96HQ0 510 aaPredicted RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 CYP2S1Q96SQ9 504 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 LGMNQ99538 433 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 ZDHHC5Q9C0B5 715 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 ZCWPW1Q9H0M4 648 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 LINC00597Q9H2U6 94 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 TDP1Q9NUW8 608 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 DUS2Q9NX74 493 aaKnown RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 PPP4R2Q9NY27 417 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 DPP3Q9NY33 737 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 TBC1D7Q9P0N9 293 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 KCNG1Q9UIX4 513 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 CPSF3Q9UKF6 684 aaKnown RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 MAFFQ9ULX9 164 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 PCDHB5Q9Y5E4 795 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 HEMK1Q9Y5R4 338 aaPredicted RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 WNT6Q9Y6F9 365 aa5.91□□□□□ -1.46
SPTA1-209ENST00000498708 SPTBN1Q01082 2364 aaKnown RBP5.91□□□□□ -1.46
SPTA1-209ENST00000498708 A0A0B4J269 797 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 LOC100289279A0A1B0GTE1 492 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 GOLGA8IPA6NC78 632 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 GOLGA8JA6NMD2 632 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 KCNK3O14649 394 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 SCAMP3O14828 347 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 FLRT2O43155 660 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 SUV39H1O43463 412 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 TBCAO75347 108 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 TIAF1O95411 115 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 FGF19O95750 216 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 AFPP02771 609 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 KRT19P08727 400 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 ZNF883P0CG24 379 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 HMGA1P17096 107 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 GABRG2P18507 467 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 PLCG1P19174 1290 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 CYP2F1P24903 491 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 GJB2P29033 226 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 SLC6A11P48066 632 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 MRPS21P82921 87 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 TFAMQ00059 246 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 TBC1D25Q3MII6 688 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 RILPL1Q5EBL4 403 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 EXOSC6Q5RKV6 272 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 HYIQ5T013 277 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 SCN4BQ8IWT1 228 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 CD302Q8IX05 232 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 EFCAB13Q8IY85 973 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 DCP1BQ8IZD4 617 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 SPPL2BQ8TCT7 592 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 OSCP1Q8WVF1 389 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 POMGNT1Q8WZA1 660 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 MRPS31Q92665 395 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 RAD54LQ92698 747 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 ERLEC1Q96DZ1 483 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 SAAL1Q96ER3 474 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 SLC22A12Q96S37 553 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 NRSN2Q9GZP1 204 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 FAM124BQ9H5Z6 455 aaPredicted RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 PARVGQ9HBI0 331 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 BLOC1S4Q9NUP1 217 aa5.9□□□□□ -1.46
SPTA1-209ENST00000498708 DDX43Q9NXZ2 648 aaKnown RBP5.9□□□□□ -1.46
SPTA1-209ENST00000498708 CALCOCO1Q9P1Z2 691 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms