RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CLTCQ00610 1675 aaKnown RBP5.53□□□□□ -1.52
SSR3-209ENST00000498205 SHPRHQ149N8 1683 aa5.53□□□□□ -1.52
SSR3-209ENST00000498205 CENPJQ9HC77 1338 aaPredicted RBP5.52□□□□□ -1.53
SSR3-209ENST00000498205 GLI2P10070 1586 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 PPP6CO00743 305 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 ZSCAN9O15535 394 aaPredicted RBP5.52□□□□□ -1.53
SSR3-209ENST00000498205 USP12O75317 370 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 CYP2A6P11509 494 aaPredicted RBP5.52□□□□□ -1.53
SSR3-209ENST00000498205 APEHP13798 732 aaKnown RBP5.52□□□□□ -1.53
SSR3-209ENST00000498205 KCNB1Q14721 858 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 ZNF782Q6ZMW2 699 aaPredicted RBP5.52□□□□□ -1.53
SSR3-209ENST00000498205 DCDC5Q6ZRR9 648 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 NEK8Q86SG6 692 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 C16orf71Q8IYS4 520 aaPredicted RBP5.52□□□□□ -1.53
SSR3-209ENST00000498205 CLASRPQ8N2M8 674 aaKnown RBP5.52□□□□□ -1.53
SSR3-209ENST00000498205 GALNT16Q8N428 558 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 AFAP1Q8N556 730 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 GLIS1Q8NBF1 620 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 MAFAQ8NHW3 353 aaPredicted RBP5.52□□□□□ -1.53
SSR3-209ENST00000498205 ZNF398Q8TD17 642 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 EDC3Q96F86 508 aaKnown RBP5.52□□□□□ -1.53
SSR3-209ENST00000498205 POLR3GLQ9BT43 218 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 STK33Q9BYT3 514 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.52□□□□□ -1.53
SSR3-209ENST00000498205 TMEM8AQ9HCN3 771 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 MROH2AA6NES4 1674 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 ANKRD36BQ8N2N9 1353 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 ABCC11Q96J66 1382 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 CAMSAP1Q5T5Y3 1602 aa5.52□□□□□ -1.53
SSR3-209ENST00000498205 ZNF804BA4D1E1 1349 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 IL16Q14005 1332 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 CDC42BPGQ6DT37 1551 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 QRICH2Q9H0J4 1663 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 CCDC194A0A1B0GVG4 234 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 FAM234BA2RU67 622 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 TTC34A8MYJ7 566 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 PODXLO00592 558 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 NCK2O43639 380 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 PLA2G6O60733 806 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 CBFA2T3O75081 653 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 NDST3O95803 873 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 DUSP1P28562 367 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 EPHB2P29323 1055 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 GPC5P78333 572 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 MTAPQ13126 283 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 MFSD13AQ14CX5 517 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 MPEG1Q2M385 716 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 AASDHQ4L235 1098 aaPredicted RBP5.51□□□□□ -1.53
SSR3-209ENST00000498205 CC2D1BQ5T0F9 858 aaKnown RBP5.51□□□□□ -1.53
SSR3-209ENST00000498205 ANO7Q6IWH7 933 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 USP29Q9HBJ7 922 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 SLC52A1Q9NWF4 448 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 NEXMIFQ5QGS0 1516 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 ARHGEF28Q8N1W1 1705 aaKnown RBP5.51□□□□□ -1.53
SSR3-209ENST00000498205 ANKRD26Q9UPS8 1709 aa5.51□□□□□ -1.53
SSR3-209ENST00000498205 DLC1Q96QB1 1528 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 CGB1A6NKQ9 187 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 NHLRC4P0CG21 123 aaPredicted RBP5.5□□□□□ -1.53
SSR3-209ENST00000498205 TMIGD3P0DMS9 266 aaPredicted RBP5.5□□□□□ -1.53
SSR3-209ENST00000498205 HTR3AP46098 478 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 GSTM5P46439 218 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 HSPA7P48741 367 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 JAK3P52333 1124 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 DEUP1Q05D60 604 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 CSHL1Q14406 222 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 BRD3Q15059 726 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 SRSF7Q16629 238 aaKnown RBP eCLIP5.5□□□□□ -1.53
SSR3-209ENST00000498205 RAP1GAP2Q684P5 730 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 MIS18BP1Q6P0N0 1132 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 RANBP10Q6VN20 620 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 RASGRP3Q8IV61 690 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 SYTL1Q8IYJ3 562 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 TMEM41AQ96HV5 264 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 EIF3CQ99613 913 aaKnown RBP5.5□□□□□ -1.53
SSR3-209ENST00000498205 ADGRE3Q9BY15 652 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 LPAR3Q9UBY5 353 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 NFU1Q9UMS0 254 aa5.5□□□□□ -1.53
SSR3-209ENST00000498205 WDR17Q8IZU2 1322 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 PPIP5K1Q6PFW1 1433 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 CD109Q6YHK3 1445 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 AGLP35573 1532 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 ARHGEF40Q8TER5 1519 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 CYP2D7A0A087X1C5 515 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 CLIC1O00299 241 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 DSCR3O14972 297 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 SLC3A2P08195 630 aaKnown RBP5.49□□□□□ -1.53
SSR3-209ENST00000498205 CYP2D6P10635 497 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 KELP23276 732 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 TECP42680 631 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 SEMA3BQ13214 749 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 FHL3Q13643 280 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 CBFBQ13951 182 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 UBE4AQ14139 1066 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 RAB30Q15771 203 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 TRIM71Q2Q1W2 868 aaKnown RBP5.49□□□□□ -1.53
SSR3-209ENST00000498205 MEX3CQ5U5Q3 659 aaKnown RBP5.49□□□□□ -1.53
SSR3-209ENST00000498205 GRHL2Q6ISB3 625 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 TOGARAM2Q6ZUX3 1019 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 SAMD3Q8N6K7 520 aa5.49□□□□□ -1.53
SSR3-209ENST00000498205 GJB4Q9NTQ9 266 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms