RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, human

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-215	ENST00000498189	SEMA4G	Q9NTN9	838 aa		7.32	□□□□□ -1.24
BBS9-215	ENST00000498189	CLIC5	Q9NZA1	410 aa		7.32	□□□□□ -1.24
BBS9-215	ENST00000498189	DEC1	Q9P2X7	70 aa		7.32	□□□□□ -1.24
BBS9-215	ENST00000498189	HESX1	Q9UBX0	185 aa		7.32	□□□□□ -1.24
BBS9-215	ENST00000498189	MMP17	Q9ULZ9	603 aa		7.32	□□□□□ -1.24
BBS9-215	ENST00000498189	CPQ	Q9Y646	472 aa		7.32	□□□□□ -1.24
BBS9-215	ENST00000498189	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	7.32	□□□□□ -1.24
BBS9-215	ENST00000498189	PTPRJ	Q12913	1337 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	SART1	O43290	800 aa	Known RBP	7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	TIMM44	O43615	452 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	TLR5	O60602	858 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	TADA3	O75528	432 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	ALX3	O95076	343 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	EPN2	O95208	641 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	HLA-DRA	P01903	254 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	ZDHHC11B	P0C7U3	371 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	SCNN1A	P37088	669 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	RAP1GAP	P47736	663 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	SOX9	P48436	509 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	FNTB	P49356	437 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	GPR15	P49685	360 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	MXI1	P50539	228 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	NDUFA8	P51970	172 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	SNX16	P57768	344 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	LMAN2	Q12907	356 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	HNRNPD	Q14103	355 aa	Known RBP	7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	DMC1	Q14565	340 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	DHCR24	Q15392	516 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	AASDH	Q4L235	1098 aa	Predicted RBP	7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	DAB2IP	Q5VWQ8	1189 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	FSTL4	Q6MZW2	842 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	TXNDC11	Q6PKC3	985 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	PRR23C	Q6ZRP0	262 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	HTR3D	Q70Z44	454 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	CCDC186	Q7Z3E2	898 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	FILIP1	Q7Z7B0	1213 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	TMEM130	Q8N3G9	435 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	ST13P5	Q8NFI4	369 aa	Predicted RBP	7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	RPLP0P6	Q8NHW5	317 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	CEP76	Q8TAP6	659 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	GOLGA1	Q92805	767 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	HPS3	Q969F9	1004 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	SMARCE1	Q969G3	411 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	JAKMIP2	Q96AA8	810 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	CYFIP2	Q96F07	1278 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	DHTKD1	Q96HY7	919 aa	Predicted RBP	7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	LRRC3B	Q96PB8	259 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	MUC3B	Q9H195	1237 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	ARHGEF4	Q9NR80	690 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	RAB20	Q9NX57	234 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	CFAP97	Q9P2B7	532 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	CCL26	Q9Y258	94 aa		7.31	□□□□□ -1.24
BBS9-215	ENST00000498189	C2orf78	A6NCI8	922 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	TBC1D3B	A6NDS4	549 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	AP5Z1	O43299	807 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	ATP2C2	O75185	946 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	CILP	O75339	1184 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	ZRANB2	O95218	330 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	KAT7	O95251	611 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	LATS1	O95835	1130 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	EGF	P01133	1207 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	ARSA	P15289	507 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	NDST1	P52848	882 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	EIF4H	Q15056	248 aa	Known RBP	7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	CRY1	Q16526	586 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	SDHAF4	Q5VUM1	108 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	TRIM68	Q6AZZ1	485 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	TSSK4	Q6SA08	328 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	LPCAT2	Q7L5N7	544 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	ACOT1	Q86TX2	421 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	RASSF3	Q86WH2	238 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	CCDC117	Q8IWD4	279 aa	Predicted RBP	7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	FUK	Q8N0W3	1084 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	SCML4	Q8N228	414 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	ZSWIM2	Q8NEG5	633 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	SLC2A14	Q8TDB8	520 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	USP33	Q8TEY7	942 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	RMDN1	Q96DB5	314 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	CYP2S1	Q96SQ9	504 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	DDX50	Q9BQ39	737 aa	Known RBP	7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	DUSP16	Q9BY84	665 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	SLC2A11	Q9BYW1	496 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	ZNF518B	Q9C0D4	1074 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	IKZF4	Q9H2S9	585 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	FBRS	Q9HAH7	460 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	SPHK2	Q9NRA0	654 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	RBM12	Q9NTZ6	932 aa	Known RBP	7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	SEPT3	Q9UH03	358 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	ARMCX3	Q9UH62	379 aa	Predicted RBP	7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	TPX2	Q9ULW0	747 aa	Known RBP	7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	WNT6	Q9Y6F9	365 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	PTPRD	P23468	1912 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	HELZ	P42694	1942 aa	Known RBP	7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	OBSL1	O75147	1896 aa		7.3	□□□□□ -1.24
BBS9-215	ENST00000498189	GREB1	Q4ZG55	1949 aa		7.29	□□□□□ -1.24
BBS9-215	ENST00000498189	TYW5	A2RUC4	315 aa	Known RBP	7.29	□□□□□ -1.24
BBS9-215	ENST00000498189		F8W735	103 aa	Predicted RBP	7.29	□□□□□ -1.24
BBS9-215	ENST00000498189	COCH	O43405	550 aa		7.29	□□□□□ -1.24
BBS9-215	ENST00000498189	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.29	□□□□□ -1.24
BBS9-215	ENST00000498189	FBXO21	O94952	628 aa		7.29	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms