RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 CYB5D2Q8WUJ1 264 aa13.24□□□□□ -0.29
TRIM27-207ENST00000498117 JAKMIP2Q96AA8 810 aa13.24□□□□□ -0.29
TRIM27-207ENST00000498117 ZNF578Q96N58 590 aaPredicted RBP13.24□□□□□ -0.29
TRIM27-207ENST00000498117 PANK2Q9BZ23 570 aa13.24□□□□□ -0.29
TRIM27-207ENST00000498117 LRRC27Q9C0I9 530 aa13.24□□□□□ -0.29
TRIM27-207ENST00000498117 GZF1Q9H116 711 aaPredicted RBP13.24□□□□□ -0.29
TRIM27-207ENST00000498117 AASDHPPTQ9NRN7 309 aa13.24□□□□□ -0.29
TRIM27-207ENST00000498117 ADAMTS1Q9UHI8 967 aa13.24□□□□□ -0.29
TRIM27-207ENST00000498117 FBXO2Q9UK22 296 aaPredicted RBP13.24□□□□□ -0.29
TRIM27-207ENST00000498117 STRIP2Q9ULQ0 834 aa13.24□□□□□ -0.29
TRIM27-207ENST00000498117 SCML1Q9UN30 329 aa13.24□□□□□ -0.29
TRIM27-207ENST00000498117 MYLKQ15746 1914 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 WNT1P04628 370 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 ATP5BP06576 529 aaKnown RBP13.23□□□□□ -0.29
TRIM27-207ENST00000498117 EPHA8P29322 1005 aaPredicted RBP13.23□□□□□ -0.29
TRIM27-207ENST00000498117 HLA-FP30511 346 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 E2F1Q01094 437 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 SGSM1Q2NKQ1 1148 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 SLC45A4Q5BKX6 768 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 CHST9Q7L1S5 443 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 EPM2AIP1Q7L775 607 aaPredicted RBP13.23□□□□□ -0.29
TRIM27-207ENST00000498117 FAM217AQ8IXS0 508 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 LSMEM2Q8N112 164 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 OXR1Q8N573 874 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 DCBLD1Q8N8Z6 715 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 CYFIP2Q96F07 1278 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 NAF1Q96HR8 494 aaKnown RBP13.23□□□□□ -0.29
TRIM27-207ENST00000498117 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 SEMA4CQ9C0C4 833 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 FBXL12Q9NXK8 326 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 CLIC4Q9Y696 253 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 USP3Q9Y6I4 520 aa13.23□□□□□ -0.29
TRIM27-207ENST00000498117 SLC12A8A0AV02 714 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 LRRC72A6NJI9 287 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 MT-CO3P00414 261 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 C4BPAP04003 597 aaKnown RBP13.22□□□□□ -0.29
TRIM27-207ENST00000498117 DLDP09622 509 aaKnown RBP13.22□□□□□ -0.29
TRIM27-207ENST00000498117 HOXD9P28356 352 aaPredicted RBP13.22□□□□□ -0.29
TRIM27-207ENST00000498117 RXRGP48443 463 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 GALCP54803 685 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 ZNF445P59923 1031 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 INSM1Q01101 510 aaPredicted RBP13.22□□□□□ -0.29
TRIM27-207ENST00000498117 BNIP3Q12983 259 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 LY6DQ14210 128 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 NCEH1Q6PIU2 408 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 DHX40Q8IX18 779 aaKnown RBP13.22□□□□□ -0.29
TRIM27-207ENST00000498117 AHI1Q8N157 1196 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 ARHGAP18Q8N392 663 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 PABPC3Q9H361 631 aaKnown RBP13.22□□□□□ -0.29
TRIM27-207ENST00000498117 ERVMER34-1Q9H9K5 563 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 CPNE5Q9HCH3 593 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 MARCH2Q9P0N8 246 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
TRIM27-207ENST00000498117 HMGXB4Q9UGU5 601 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 SMC3Q9UQE7 1217 aa13.22□□□□□ -0.29
TRIM27-207ENST00000498117 A0A1W2PR77 199 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 PYCARD-AS1I3L0S3 204 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 TLR4O00206 839 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 SLC28A2O43868 658 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 EXOC3O60645 756 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 RNASEH1O60930 286 aaKnown RBP13.21□□□□□ -0.29
TRIM27-207ENST00000498117 RPN1P04843 607 aaKnown RBP13.21□□□□□ -0.29
TRIM27-207ENST00000498117 ACP1P24666 158 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 CASP4P49662 377 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 SFMBT2Q5VUG0 894 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 MBLAC2Q68D91 279 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 KDM7AQ6ZMT4 941 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 RSRC2Q7L4I2 434 aaKnown RBP13.21□□□□□ -0.29
TRIM27-207ENST00000498117 ADIPOR2Q86V24 386 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 C12orf56Q8IXR9 622 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRIM27-207ENST00000498117 OR2T34Q8NGX1 318 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 PARD3BQ8TEW8 1205 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 TAF4BQ92750 862 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 ELMO3Q96BJ8 720 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 PLD4Q96BZ4 506 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 TMA16Q96EY4 203 aaKnown RBP13.21□□□□□ -0.29
TRIM27-207ENST00000498117 MED8Q96G25 268 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 HIC2Q96JB3 615 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 TMX3Q96JJ7 454 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 RSPH9Q9H1X1 276 aaPredicted RBP13.21□□□□□ -0.29
TRIM27-207ENST00000498117 TNMDQ9H2S6 317 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 EBF2Q9HAK2 575 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 ABCB8Q9NUT2 735 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 GGA2Q9UJY4 613 aa13.21□□□□□ -0.29
TRIM27-207ENST00000498117 TPX2Q9ULW0 747 aaKnown RBP13.21□□□□□ -0.29
TRIM27-207ENST00000498117 ARID1BQ8NFD5 2236 aaPredicted RBP13.21□□□□□ -0.29
TRIM27-207ENST00000498117 UBE4BO95155 1302 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.2□□□□□ -0.3
TRIM27-207ENST00000498117 KIF20AO95235 890 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 VNN1O95497 513 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 PABPC1P11940 636 aaKnown RBP13.2□□□□□ -0.3
TRIM27-207ENST00000498117 POLR2EP19388 210 aaKnown RBP13.2□□□□□ -0.3
TRIM27-207ENST00000498117 HARS2P49590 506 aaKnown RBP13.2□□□□□ -0.3
TRIM27-207ENST00000498117 CCR5P51681 352 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 NXPH1P58417 271 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 CLDN10P78369 228 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 AMPD3Q01432 767 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 VAC14Q08AM6 782 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms