RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TCP11Q8WWU5 503 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 APPBP2Q92624 585 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 MUCL1Q96DR8 90 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 RBM17Q96I25 401 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 RDH12Q96NR8 316 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 FSD1Q9BTV5 496 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SEMA6AQ9H2E6 1030 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ZFYVE28Q9HCC9 887 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SEMA4BQ9NPR2 832 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 SNRKQ9NRH2 765 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 DUS2Q9NX74 493 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 TEX10Q9NXF1 929 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 KLK14Q9P0G3 267 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 HDAC6Q9UBN7 1215 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 CYTH4Q9UIA0 394 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 PSORS1C2Q9UIG4 136 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 NEU3Q9UQ49 428 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 EFR3BQ9Y2G0 817 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 COG6Q9Y2V7 657 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 HRH3Q9Y5N1 445 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 PIK3C2BO00750 1634 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SCN11AQ9UI33 1791 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZNF407Q9C0G0 2248 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 HIVEP2P31629 2446 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 HELZ2Q9BYK8 2649 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 A0A1B0GVC2 190 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 HELTA6NFD8 242 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CAPN14A8MX76 684 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PSMD9O00233 223 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ABLIM1O14639 778 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RAMP2O60895 175 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TADA2AO75478 443 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 UTP20O75691 2785 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 HTR3BO95264 441 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 VNN1O95497 513 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ANP32DO95626 131 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 EIF4EP06730 217 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 PFKMP08237 780 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 C4AP0C0L4 1744 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ERVK-10P10266 1014 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 HOXD8P13378 290 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 CHRNB2P17787 502 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ARRB2P32121 409 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GIPRP48546 466 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SORDQ00796 357 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TSTA3Q13630 321 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 IKBKEQ14164 716 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 NOMO1Q15155 1222 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZRSR1Q15695 479 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 ALX1Q15699 326 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 MPP7Q5T2T1 576 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SPTY2D1Q68D10 685 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 TNFAIP8L2Q6P589 184 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 SLC25A34Q6PIV7 304 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 Q8N3U1 123 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RTL3Q8N8U3 475 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 FSIP1Q8NA03 581 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CCDC112Q8NEF3 446 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 BBS1Q8NFJ9 593 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SORCS1Q8WY21 1168 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 NXPE3Q969Y0 559 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZBTB9Q96C00 473 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 DYNLL2Q96FJ2 89 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TEP1Q99973 2627 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 TRMOQ9BU70 441 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TRIM5Q9C035 493 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GPR88Q9GZN0 384 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SLITRK2Q9H156 845 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RPAP3Q9H6T3 665 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 REEP1Q9H902 201 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PDE11AQ9HCR9 933 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SLC39A2Q9NP94 309 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OLA1Q9NTK5 396 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZCCHC3Q9NUD5 404 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 SLC12A4Q9UP95 1085 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CORO2BQ9UQ03 480 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ARL2BPQ9Y2Y0 163 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PCDHGB1Q9Y5G3 927 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PCDHGA7Q9Y5G6 932 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 WNT6Q9Y6F9 365 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ST20-MTHFSA0A0A6YYL1 179 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RGSL1A5PLK6 1076 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ABCD4O14678 606 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 WDR46O15213 610 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZNF500O60304 480 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 LDB3O75112 727 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ECDO95905 644 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 CYP1A2P05177 515 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZFYP08048 801 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 PLEKP08567 350 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 HOXB7P09629 217 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PABPC1P11940 636 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 HSP90B1P14625 803 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZNF16P17020 682 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 CSRP1P21291 193 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 FBLN1P23142 703 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 FPR3P25089 353 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GRK3P35626 688 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 MAGEA10P43363 369 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms