RNA–Protein interactions for RNA: ENST00000498054.1

POLR1B-215, Transcript of RNA polymerase I subunit B, human

TSL 3

Gene POLR1B, Length 636 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1B-215	ENST00000498054	TBC1D3G	Q6DHY5	549 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	LAIR1	Q6GTX8	287 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	TBC1D3C	Q6IPX1	549 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	KIRREL2	Q6UWL6	708 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	TMEM57	Q8N5G2	664 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	PNPLA1	Q8N8W4	532 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	CEP70	Q8NHQ1	597 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	LINC00476	Q8WZB0	136 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	CTHRC1	Q96CG8	243 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	FAR2	Q96K12	515 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	HS6ST2	Q96MM7	605 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	SAP30L	Q9HAJ7	183 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	SYBU	Q9NX95	663 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	TRPC5	Q9UL62	973 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	HS3ST3A1	Q9Y663	406 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	COL4A3	Q01955	1670 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	STRCP1	A6NGW2	1772 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	ZNF518A	Q6AHZ1	1483 aa		4.88	□□□□□ -1.63
POLR1B-215	ENST00000498054	CPS1	P31327	1500 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	SYNM	O15061	1565 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	PLXNC1	O60486	1568 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	KIF14	Q15058	1648 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	PREX2	Q70Z35	1606 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	RNF17	Q9BXT8	1623 aa	Known RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	CLTC	Q00610	1675 aa	Known RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	CCDC187	A0A096LP49	1063 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	NCAM2	O15394	837 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	MYCL	P12524	364 aa	Predicted RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	CKMT1A	P12532	417 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	TGM1	P22735	817 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	CXCR5	P32302	372 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	ADRA1B	P35368	520 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	IGHMBP2	P38935	993 aa	Known RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	ABHD18	Q0P651	414 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	LMAN2	Q12907	356 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	SLC4A8	Q2Y0W8	1093 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	TRIM60	Q495X7	471 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	TTC22	Q5TAA0	569 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	ANKRD16	Q6P6B7	361 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	LVRN	Q6Q4G3	990 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	MTHFD1L	Q6UB35	978 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	RINL	Q6ZS11	566 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	SLC29A4	Q7RTT9	530 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	RASAL3	Q86YV0	1011 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	LARP4B	Q92615	738 aa	Known RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	USP13	Q92995	863 aa	Predicted RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	CIPC	Q9C0C6	399 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	SLC12A4	Q9UP95	1085 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	LZTS1	Q9Y250	596 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	RRP7A	Q9Y3A4	280 aa	Known RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	PCDHA10	Q9Y5I2	948 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	XIRP1	Q702N8	1843 aa	Known RBP	4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	NPAT	Q14207	1427 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	TRAPPC8	Q9Y2L5	1435 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	KAT6A	Q92794	2004 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	VWDE	Q8N2E2	1590 aa		4.87	□□□□□ -1.63
POLR1B-215	ENST00000498054	TMEM191C	A6NGB0	347 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	AGAP5	A6NIR3	686 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054		M0QZQ0	153 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	TK1	P04183	234 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	SLC3A2	P08195	630 aa	Known RBP	4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	ELFN1	P0C7U0	828 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	PCSK6	P29122	969 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	GALNS	P34059	522 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	GRK5	P34947	590 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	DNASE1L3	Q13609	305 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	ZNF169	Q14929	603 aa	Predicted RBP	4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	FAM110C	Q1W6H9	321 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	AAK1	Q2M2I8	961 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	AARS2	Q5JTZ9	985 aa	Known RBP	4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	AKNAD1	Q5T1N1	836 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	ZNF627	Q7L945	461 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	SFTPA1	Q8IWL2	248 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	C12orf76	Q8N812	135 aa	Predicted RBP	4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	PNISR	Q8TF01	805 aa	Known RBP	4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	SDCCAG3	Q96C92	435 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	MAEL	Q96JY0	434 aa	Known RBP	4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	TBATA	Q96M53	351 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	MMS19	Q96T76	1030 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	FSD1L	Q9BXM9	530 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	IL17RB	Q9NRM6	502 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	IFT80	Q9P2H3	777 aa	Predicted RBP	4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	ZBTB1	Q9Y2K1	713 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	PLCH2	O75038	1416 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	MLH3	Q9UHC1	1453 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	ABCC1	P33527	1531 aa		4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	DNMT1	P26358	1616 aa	Known RBP	4.86	□□□□□ -1.63
POLR1B-215	ENST00000498054	GRID2IP	A4D2P6	1211 aa		4.85	□□□□□ -1.63
POLR1B-215	ENST00000498054	SLC38A8	A6NNN8	435 aa		4.85	□□□□□ -1.63
POLR1B-215	ENST00000498054	PRAMEF2	O60811	474 aa		4.85	□□□□□ -1.63
POLR1B-215	ENST00000498054	C1R	P00736	705 aa		4.85	□□□□□ -1.63
POLR1B-215	ENST00000498054	C6	P13671	934 aa		4.85	□□□□□ -1.63
POLR1B-215	ENST00000498054	CPA1	P15085	419 aa		4.85	□□□□□ -1.63
POLR1B-215	ENST00000498054	XBP1	P17861	261 aa		4.85	□□□□□ -1.63
POLR1B-215	ENST00000498054	CD53	P19397	219 aa		4.85	□□□□□ -1.63
POLR1B-215	ENST00000498054	JAK3	P52333	1124 aa		4.85	□□□□□ -1.63

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