RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	MED10	Q9BTT4	135 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	BBS2	Q9BXC9	721 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	ZNF518B	Q9C0D4	1074 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	SLC6A17	Q9H1V8	727 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	GAREM1	Q9H706	876 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	INTS13	Q9NVM9	706 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	CACNA2D2	Q9NY47	1150 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	TMEM63C	Q9P1W3	806 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	CCDC39	Q9UFE4	941 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	PCOLCE2	Q9UKZ9	415 aa		11.46	□□□□□ -0.57
SKAP2-209	ENST00000497511	ITPR1	Q14643	2758 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	PI4KA	P42356	2102 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	FREM2	Q5SZK8	3169 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	LAMA5	O15230	3695 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	ZNF233	A6NK53	670 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511		A8MXQ7	604 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	GJB3	O75712	270 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	NCAM1	P13591	858 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	PTPN1	P18031	435 aa	Known RBP	11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	MATK	P42679	507 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	CYP4F3	Q08477	520 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	GOLGA8F	Q08AF8	430 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	GOLGA8DP	Q0D2H9	430 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	C19orf57	Q0VDD7	668 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	ALCAM	Q13740	583 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	IL27RA	Q6UWB1	636 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	TPGS1	Q6ZTW0	290 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	OR5B17	Q8NGF7	314 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	CXorf38	Q8TB03	319 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	OVCA2	Q8WZ82	227 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	TOE1	Q96GM8	510 aa	Known RBP	11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	MRGPRX1	Q96LB2	322 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	CDC6	Q99741	560 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	MRPL45	Q9BRJ2	306 aa	Known RBP	11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	GPR174	Q9BXC1	333 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	CCSER2	Q9H7U1	834 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	CD93	Q9NPY3	652 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	TM7SF3	Q9NS93	570 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	LSM7	Q9UK45	103 aa	Known RBP	11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	NBEA	Q8NFP9	2946 aa		11.45	□□□□□ -0.58
SKAP2-209	ENST00000497511	ACACA	Q13085	2346 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	GCN1	Q92616	2671 aa	Known RBP	11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	CLDN5	O00501	218 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	FZD6	O60353	706 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	TYR	P14679	529 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	TNNI1	P19237	187 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	ABCG1	P45844	678 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	CACNA2D1	P54289	1103 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	GRIN1	Q05586	938 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	SUZ12	Q15022	739 aa	Known RBP	11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	RRAGB	Q5VZM2	374 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	SV2B	Q7L1I2	683 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	TMPRSS7	Q7RTY8	843 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	GLRX5	Q86SX6	157 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	GALNT15	Q8N3T1	639 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	ENGASE	Q8NFI3	743 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	SNX19	Q92543	992 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	GABRG3	Q99928	467 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	SPOCK3	Q9BQ16	436 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	IL21R	Q9HBE5	538 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	WDR35	Q9P2L0	1181 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	ADAMTS9	Q9P2N4	1935 aa		11.44	□□□□□ -0.58
SKAP2-209	ENST00000497511	APC2	O95996	2303 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	SMG1	Q96Q15	3661 aa	Known RBP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	TRABD2B	A6NFA1	517 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	KIAA0391	O15091	583 aa	Known RBP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	BCAT2	O15382	392 aa	Predicted RBP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	FLRT2	O43155	660 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	SYNCRIP	O60506	623 aa	Known RBP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	CBFA2T3	O75081	653 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	CILP	O75339	1184 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	ITGB2	P05107	769 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	ATXN1L	P0C7T5	689 aa	Known RBP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	DLAT	P10515	647 aa	Known RBP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	ACADM	P11310	421 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	CES1	P23141	567 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	SLC5A3	P53794	718 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	TRPC3	Q13507	836 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	WDR72	Q3MJ13	1102 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	DCAF12L1	Q5VU92	463 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	STXBP4	Q6ZWJ1	553 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	TRAPPC11	Q7Z392	1133 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	LIMS2	Q7Z4I7	341 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	CD163	Q86VB7	1156 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	MARCH9	Q86YJ5	346 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	CBWD2	Q8IUF1	395 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	WDR49	Q8IV35	697 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	B3GALNT2	Q8NCR0	500 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	STRA6	Q9BX79	667 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	MUC3B	Q9H195	1237 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	DPEP3	Q9H4B8	488 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	GMIP	Q9P107	970 aa		11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	FLNB	O75369	2602 aa	Known RBP	11.43	□□□□□ -0.58
SKAP2-209	ENST00000497511	PTPRD	P23468	1912 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms