RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 RAPGEFL1Q9UHV5 662 aa11.91□□□□□ -0.5
HLA-B-254ENST00000497377 FBXO10Q9UK96 956 aa11.91□□□□□ -0.5
HLA-B-254ENST00000497377 PAXBP1Q9Y5B6 917 aa11.91□□□□□ -0.5
HLA-B-254ENST00000497377 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.91□□□□□ -0.5
HLA-B-254ENST00000497377 BZW2Q9Y6E2 419 aaKnown RBP11.91□□□□□ -0.5
HLA-B-254ENST00000497377 TYW5A2RUC4 315 aaKnown RBP11.9□□□□□ -0.5
HLA-B-254ENST00000497377 TBC1D3BA6NDS4 549 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 K7EQS6 105 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 SMAPO00193 183 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 GFRA2O00451 464 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 RNF40O75150 1001 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 GRAP2O75791 330 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 SP9P0CG40 484 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 TNFAIP3P21580 790 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 HOXA6P31267 233 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 SLC6A11P48066 632 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 DGKGP49619 791 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 ZBED6P86452 979 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 NHLH1Q02575 133 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 KLHL30Q0D2K2 578 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 TRIM14Q14142 442 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 GAS6Q14393 721 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 SLC25A52Q3SY17 297 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 ZC3H14Q6PJT7 736 aaKnown RBP11.9□□□□□ -0.5
HLA-B-254ENST00000497377 MMS22LQ6ZRQ5 1243 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 MAML2Q8IZL2 1156 aaPredicted RBP11.9□□□□□ -0.5
HLA-B-254ENST00000497377 NAT16Q8N8M0 369 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 RNF214Q8ND24 703 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 SLC30A5Q8TAD4 765 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 ADAM32Q8TC27 787 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 DDI1Q8WTU0 396 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 EZH1Q92800 747 aaPredicted RBP11.9□□□□□ -0.5
HLA-B-254ENST00000497377 ATOH1Q92858 354 aaPredicted RBP11.9□□□□□ -0.5
HLA-B-254ENST00000497377 NT5C3BQ969T7 300 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 TMA16Q96EY4 203 aaKnown RBP11.9□□□□□ -0.5
HLA-B-254ENST00000497377 PGAP3Q96FM1 320 aaPredicted RBP11.9□□□□□ -0.5
HLA-B-254ENST00000497377 VCPIP1Q96JH7 1222 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 PCDHB18PQ96TA0 734 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 NPY6RQ99463 290 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 SYT11Q9BT88 431 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 XPO4Q9C0E2 1151 aaKnown RBP11.9□□□□□ -0.5
HLA-B-254ENST00000497377 ADAM22Q9P0K1 906 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 TMEM59LQ9UK28 342 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 CAPN11Q9UMQ6 739 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 SLC27A6Q9Y2P4 619 aa11.9□□□□□ -0.5
HLA-B-254ENST00000497377 GOLGA8SH3BPF8 625 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 M0QYT0 321 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 ABCB4P21439 1286 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 RNASE9P60153 205 aaKnown RBP11.89□□□□□ -0.51
HLA-B-254ENST00000497377 KCNC4Q03721 635 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 CSTF1Q05048 431 aaKnown RBP11.89□□□□□ -0.51
HLA-B-254ENST00000497377 KDSRQ06136 332 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 PTP4A2Q12974 167 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 ZC3H12AQ5D1E8 599 aaKnown RBP11.89□□□□□ -0.51
HLA-B-254ENST00000497377 BRMS1LQ5PSV4 323 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 ACBD5Q5T8D3 534 aaPredicted RBP11.89□□□□□ -0.51
HLA-B-254ENST00000497377 PIK3R6Q5UE93 754 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 ACAD10Q6JQN1 1059 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 SND1Q7KZF4 910 aaKnown RBP eCLIP11.89□□□□□ -0.514e-8■■□□□ 12.5
HLA-B-254ENST00000497377 MON1BQ7L1V2 547 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 SYT13Q7L8C5 426 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 TRMT11Q7Z4G4 463 aaKnown RBP11.89□□□□□ -0.51
HLA-B-254ENST00000497377 RPLP0P6Q8NHW5 317 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 USP33Q8TEY7 942 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 BHMTQ93088 406 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 RNF34Q969K3 372 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 C11orf70Q9BRQ4 267 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 SEMA4AQ9H3S1 761 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 LUC7L2Q9Y383 392 aaKnown RBP11.89□□□□□ -0.51
HLA-B-254ENST00000497377 STARD13Q9Y3M8 1113 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 ATG2BQ96BY7 2078 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 FANCMQ8IYD8 2048 aa11.89□□□□□ -0.51
HLA-B-254ENST00000497377 KCNU1A8MYU2 1149 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 NPC1O15118 1278 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 CISD3P0C7P0 127 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 GZMAP12544 262 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 HOXD9P28356 352 aaPredicted RBP11.88□□□□□ -0.51
HLA-B-254ENST00000497377 NBL1P41271 181 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 KIR2DL1P43626 348 aaPredicted RBP11.88□□□□□ -0.51
HLA-B-254ENST00000497377 SULT1E1P49888 294 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 PITX1P78337 314 aaPredicted RBP11.88□□□□□ -0.51
HLA-B-254ENST00000497377 SATB1Q01826 763 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 DEUP1Q05D60 604 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 NME3Q13232 169 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 C2CD6Q53TS8 623 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 FAM133BQ5BKY9 247 aaKnown RBP11.88□□□□□ -0.51
HLA-B-254ENST00000497377 C10orf76Q5T2E6 689 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 TTC39BQ5VTQ0 682 aaPredicted RBP11.88□□□□□ -0.51
HLA-B-254ENST00000497377 RNF43Q68DV7 783 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 SPECC1LQ69YQ0 1117 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 NADSYN1Q6IA69 706 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 SARM1Q6SZW1 724 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 VPS36Q86VN1 386 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 CAMKK1Q8N5S9 505 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 HJURPQ8NCD3 748 aaPredicted RBP11.88□□□□□ -0.51
HLA-B-254ENST00000497377 C3orf20Q8ND61 904 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 NELL1Q92832 810 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 FAM122AQ96E09 287 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 SELENOOQ9BVL4 669 aa11.88□□□□□ -0.51
HLA-B-254ENST00000497377 HAUS4Q9H6D7 363 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms