RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PGM2L1Q6PCE3 622 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PDZD4Q76G19 769 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ERO1BQ86YB8 467 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CLVS1Q8IUQ0 354 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TMEFF1Q8IYR6 380 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 LILRA2Q8N149 483 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ANKRD52Q8NB46 1076 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 OR7G1Q8NGA0 311 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CENPIQ92674 756 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 LTV1Q96GA3 475 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ANKRD36BP1Q96IX9 119 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 NSMCE3Q96MG7 304 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ACAT2Q9BWD1 397 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TFB2MQ9H5Q4 396 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GORASP2Q9H8Y8 452 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 AGO4Q9HCK5 861 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 HAUS2Q9NVX0 235 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TAS2R7Q9NYW3 318 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 EXTL2Q9UBQ6 330 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC8A2Q9UPR5 921 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SNX9Q9Y5X1 595 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ZFP37Q9Y6Q3 630 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PCF11O94913 1555 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TCAF2A6NFQ2 919 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SYCE1LA8MT33 242 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PRR5-ARHGAP8B1AHC4 643 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 B4E171 279 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLGA8KD6RF30 607 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 E7EVH7 732 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 K7EPI3 171 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TPP1O14773 563 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 MAFKO60675 156 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 KERAO60938 352 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CRTAPO75718 401 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ENDOD1O94919 500 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CYBBP04839 570 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 HMGN1P05114 100 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 URODP06132 367 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ANXA8P13928 327 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PNLIPP16233 465 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT15P19012 456 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 RXRAP19793 462 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 LPOP22079 712 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 HTR2BP41595 481 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 DNAJC3Q13217 504 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GTF2H3Q13889 308 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ERV3-1Q14264 604 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PCBP1Q15365 356 aaKnown RBP eCLIP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 UGP2Q16851 508 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 MYLK3Q32MK0 819 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 LEXMQ3ZCV2 418 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ANXA8L1Q5VT79 327 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TCERG1LQ5VWI1 586 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SHEQ5VZ18 495 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CYB5RLQ6IPT4 315 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TRIM65Q6PJ69 517 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CD300LDQ6UXZ3 194 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 USP50Q70EL3 339 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 UNC13DQ70J99 1090 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC25Q86WR0 208 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CEP97Q8IW35 865 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CDH26Q8IXH8 852 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 KIRREL3Q8IZU9 778 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CPA6Q8N4T0 437 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 AVL9Q8NBF6 648 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 DENND6BQ8NEG7 585 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TTLQ8NG68 377 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 MOSPD2Q8NHP6 518 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TEX47Q8TBZ9 253 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC26A7Q8TE54 656 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ADAMTS18Q8TE60 1221 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 INPP5DQ92835 1189 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TMIGD2Q96BF3 282 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC127Q96BQ5 260 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TMA16Q96EY4 203 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 MSANTD3Q96H12 275 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ZSCAN31Q96LW9 406 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CFAP57Q96MR6 1250 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TRAPPC9Q96Q05 1148 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TESK2Q96S53 571 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CDC6Q99741 560 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PIP5K1AQ99755 562 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 MENTQ9BUN1 341 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 MLPHQ9BV36 600 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CARD6Q9BX69 1037 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PAIP1Q9H074 479 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SMOC1Q9H4F8 434 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 THAP9Q9H5L6 903 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 AZI2Q9H6S1 392 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 LRRC19Q9H756 370 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TMEM206Q9H813 350 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 OLA1Q9NTK5 396 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 HMG20BQ9P0W2 317 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 NDOR1Q9UHB4 597 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 C19orf53Q9UNZ5 99 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 STK38LQ9Y2H1 464 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 NOX1Q9Y5S8 564 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 USP16Q9Y5T5 823 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CAPN7Q9Y6W3 813 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 INSRP06213 1382 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms