RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 FAM122AQ96E09 287 aa19.96■□□□□ 0.79
CTDSP1-213ENST00000496785 MYOFQ9NZM1 2061 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 F5H5T6 163 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 GYPCP04921 128 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 SERPING1P05155 500 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 HOXD9P28356 352 aaPredicted RBP19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 HOXA6P31267 233 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 RDXP35241 583 aaKnown RBP19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 FLT3P36888 993 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 SATB1Q01826 763 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 EIF4HQ15056 248 aaKnown RBP19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 C2orf27AQ580R0 203 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 MS4A13Q5J8X5 152 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 EOGTQ5NDL2 527 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 RABGAP1LQ5R372 815 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 TTC39BQ5VTQ0 682 aaPredicted RBP19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 DNAJC24Q6P3W2 148 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 SARM1Q6SZW1 724 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 ANKS1BQ7Z6G8 1248 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 CAMKK1Q8N5S9 505 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 WFIKKN2Q8TEU8 576 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 TRIM11Q96F44 468 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 SEMA4AQ9H3S1 761 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 WDCPQ9H6R7 721 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 ZSCAN32Q9NX65 697 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 STARD13Q9Y3M8 1113 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 PCDHGA2Q9Y5H1 932 aa19.95■□□□□ 0.78
CTDSP1-213ENST00000496785 MUC6Q6W4X9 2439 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 FAM170AA1A519 330 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 NPC1O15118 1278 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 TBL1XO60907 577 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 CISD3P0C7P0 127 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 TACR2P21452 398 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 SLC6A4P31645 630 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 TIE1P35590 1138 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 CXCR3P49682 368 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 DMC1Q14565 340 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 TSR1Q2NL82 804 aaKnown RBP19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 E4F1Q66K89 784 aaPredicted RBP19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 NADSYN1Q6IA69 706 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 SDE2Q6IQ49 451 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 RFWD3Q6PCD5 774 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 ZNF571Q7Z3V5 609 aaPredicted RBP19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 MCOLN2Q8IZK6 566 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 ZNF513Q8N8E2 541 aaPredicted RBP19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 TBCBQ99426 244 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 PIGVQ9NUD9 493 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 MMP17Q9ULZ9 603 aa19.94■□□□□ 0.78
CTDSP1-213ENST00000496785 GOLGA6L7A0A1B0GV03 622 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 SIGLEC16A6NMB1 481 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 PDGFRAP16234 1089 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 CASP14P31944 242 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 NBL1P41271 181 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 PTPN9P43378 593 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 KIR2DL1P43626 348 aaPredicted RBP19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 RAP1GAP2Q684P5 730 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 PKN3Q6P5Z2 889 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 VSTM4Q8IW00 320 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 MFN1Q8IWA4 741 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 LGI2Q8N0V4 545 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 ATRIPQ8WXE1 791 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 CFAP57Q96MR6 1250 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 TRIM5Q9C035 493 aa19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 ZNHIT6Q9NWK9 470 aaKnown RBP19.93■□□□□ 0.78
CTDSP1-213ENST00000496785 CCDC163A0A0D9SF12 145 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 C2CD4BA6NLJ0 364 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 TRIM24O15164 1050 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 TIMM44O43615 452 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 RTN2O75298 545 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 KLF8O95600 359 aaPredicted RBP19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 SKILP12757 684 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 GPD1P21695 349 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 PLA2G5P39877 138 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 MESP2Q0VG99 397 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 CDH18Q13634 790 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 ARL13BQ3SXY8 428 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 OTUD1Q5VV17 481 aaPredicted RBP19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 RNF43Q68DV7 783 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 DCUN1D2Q6PH85 259 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 STRADAQ7RTN6 431 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 DRC7Q8IY82 874 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 EMC1Q8N766 993 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 IL17RCQ8NAC3 791 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 RXFP2Q8WXD0 754 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 NELL1Q92832 810 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 PRICKLE1Q96MT3 831 aaPredicted RBP19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 TKTL2Q9H0I9 626 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 POLMQ9NP87 494 aaPredicted RBP19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 PARVAQ9NVD7 372 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 ARHGEF38Q9NXL2 777 aa19.92■□□□□ 0.78
CTDSP1-213ENST00000496785 TMCO5BA8MYB1 307 aa19.91■□□□□ 0.78
CTDSP1-213ENST00000496785 K7ESF4 209 aa19.91■□□□□ 0.78
CTDSP1-213ENST00000496785 DDX3XO00571 662 aaKnown RBP eCLIP19.91■□□□□ 0.781e-9■□□□□ 10.9
CTDSP1-213ENST00000496785 ALDH1A2O94788 518 aa19.91■□□□□ 0.78
CTDSP1-213ENST00000496785 ENDOD1O94919 500 aa19.91■□□□□ 0.78
CTDSP1-213ENST00000496785 MYBL1P10243 752 aa19.91■□□□□ 0.78
CTDSP1-213ENST00000496785 TDGF1P13385 188 aa19.91■□□□□ 0.78
CTDSP1-213ENST00000496785 HNRNPLP14866 589 aaKnown RBP eCLIP19.91■□□□□ 0.78
CTDSP1-213ENST00000496785 NTSR1P30989 418 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms