RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 ALS2CR12Q96Q35 445 aa19■□□□□ 0.63
TSSC4-210ENST00000496468 HAPLN3Q96S86 360 aa19■□□□□ 0.63
TSSC4-210ENST00000496468 SNRNP25Q9BV90 132 aaKnown RBP19■□□□□ 0.63
TSSC4-210ENST00000496468 ZWILCHQ9H900 591 aa19■□□□□ 0.63
TSSC4-210ENST00000496468 ANLNQ9NQW6 1124 aa19■□□□□ 0.63
TSSC4-210ENST00000496468 TMPRSS4Q9NRS4 437 aa19■□□□□ 0.63
TSSC4-210ENST00000496468 AP4E1Q9UPM8 1137 aa19■□□□□ 0.63
TSSC4-210ENST00000496468 HS3ST4Q9Y661 456 aa19■□□□□ 0.63
TSSC4-210ENST00000496468 TICRRQ7Z2Z1 1910 aa19■□□□□ 0.63
TSSC4-210ENST00000496468 F5H5T6 163 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 I6L893 689 aaPredicted RBP18.99■□□□□ 0.63
TSSC4-210ENST00000496468 ARSAP15289 507 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 ADRA1BP35368 520 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 CHKAP35790 457 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 TDGQ13569 410 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 HS1BP3Q53T59 392 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 ACBD5Q5T8D3 534 aaPredicted RBP18.99■□□□□ 0.63
TSSC4-210ENST00000496468 SYCE1Q8N0S2 351 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 SLC44A3Q8N4M1 653 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 CPA6Q8N4T0 437 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 IRF7Q92985 503 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 FAM83CQ9BQN1 747 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 EBF3Q9H4W6 596 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 TRMT1Q9NXH9 659 aaKnown RBP18.99■□□□□ 0.63
TSSC4-210ENST00000496468 FZD10Q9ULW2 581 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 HYOU1Q9Y4L1 999 aa18.99■□□□□ 0.63
TSSC4-210ENST00000496468 TYW5A2RUC4 315 aaKnown RBP18.98■□□□□ 0.63
TSSC4-210ENST00000496468 GOLGA6L9A6NEM1 432 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 PALMO75781 387 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 ADH1CP00326 375 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 CYP17A1P05093 508 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 TACR2P21452 398 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 IL1R2P27930 398 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 SLC6A4P31645 630 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 ERMARDQ5T6L9 678 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 RFWD3Q6PCD5 774 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 CYP4V2Q6ZWL3 525 aaPredicted RBP18.98■□□□□ 0.63
TSSC4-210ENST00000496468 PSTKQ8IV42 348 aaKnown RBP18.98■□□□□ 0.63
TSSC4-210ENST00000496468 GJD3Q8N144 294 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 LRRC57Q8N9N7 239 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 CSGALNACT1Q8TDX6 532 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 TEKT4Q8WW24 435 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 HSPH1Q92598 858 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 PRICKLE1Q96MT3 831 aaPredicted RBP18.98■□□□□ 0.63
TSSC4-210ENST00000496468 SIK2Q9H0K1 926 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 LINC00597Q9H2U6 94 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 HPS4Q9NQG7 708 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.98■□□□□ 0.63
TSSC4-210ENST00000496468 GPATCH2LQ9NWQ4 482 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 DUSP12Q9UNI6 340 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 SORCS3Q9UPU3 1222 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 SNX10Q9Y5X0 201 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 ALG6Q9Y672 507 aa18.98■□□□□ 0.63
TSSC4-210ENST00000496468 GOLGA6L7A0A1B0GV03 622 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 ARNTLO00327 626 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 PSTPIP1O43586 416 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 CYBBP04839 570 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 KRT7P08729 469 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 SRFP11831 508 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 TAS2R40P59535 323 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 TNK2Q07912 1038 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 AUHQ13825 339 aaKnown RBP18.97■□□□□ 0.63
TSSC4-210ENST00000496468 KCNT1Q5JUK3 1230 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 RABGAP1LQ5R372 815 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 TPGS1Q6ZTW0 290 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 POLNQ7Z5Q5 900 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 RNF135Q8IUD6 432 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 REXO1L1PQ8IX06 675 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 LGI2Q8N0V4 545 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 CCAR2Q8N163 923 aaKnown RBP18.97■□□□□ 0.63
TSSC4-210ENST00000496468 HJURPQ8NCD3 748 aaPredicted RBP18.97■□□□□ 0.63
TSSC4-210ENST00000496468 KIAA1524Q8TCG1 905 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 DNASE1L2Q92874 299 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 NECAB3Q96P71 396 aaPredicted RBP18.97■□□□□ 0.63
TSSC4-210ENST00000496468 PRMT1Q99873 361 aaKnown RBP18.97■□□□□ 0.63
TSSC4-210ENST00000496468 DHX35Q9H5Z1 703 aaKnown RBP18.97■□□□□ 0.63
TSSC4-210ENST00000496468 SPHK2Q9NRA0 654 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 VANGL2Q9ULK5 521 aa18.97■□□□□ 0.63
TSSC4-210ENST00000496468 USP27XA6NNY8 438 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 TRDMT1O14717 391 aaKnown RBP18.96■□□□□ 0.63
TSSC4-210ENST00000496468 NARSO43776 548 aaKnown RBP18.96■□□□□ 0.63
TSSC4-210ENST00000496468 TSPAN3O60637 253 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 ADH5P11766 374 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 TNNT1P13805 278 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 PFKPQ01813 784 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 RUNX3Q13761 415 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 DHCR24Q15392 516 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 ANO4Q32M45 955 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 BOLA3Q53S33 107 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 LY6G5CQ5SRR4 150 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 ZFYVE27Q5T4F4 411 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 TTC39BQ5VTQ0 682 aaPredicted RBP18.96■□□□□ 0.63
TSSC4-210ENST00000496468 TXNRD3NBQ6F5E7 133 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 LRRC31Q6UY01 552 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 RHOT1Q8IXI2 618 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 C1orf74Q96LT6 269 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 RPRD1AQ96P16 312 aaPredicted RBP18.96■□□□□ 0.63
TSSC4-210ENST00000496468 EPAS1Q99814 870 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 OSBPL2Q9H1P3 480 aa18.96■□□□□ 0.63
TSSC4-210ENST00000496468 ECT2Q9H8V3 914 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms