RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 BRAFP15056 766 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 L1CAMP32004 1257 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 GRK4P32298 578 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 MSH2P43246 934 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 OR1G1P47890 313 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CCT5P48643 541 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 HNRNPH2P55795 449 aaKnown RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 YWHAGP61981 247 aaKnown RBP eCLIP7.15□□□□□ -1.26
USP39-219ENST00000496047 PRR20EP86478 221 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 PRR20CP86479 221 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 PRR20DP86480 221 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 PRR20BP86481 221 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 PRR20AP86496 221 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 SMARCB1Q12824 385 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ELAVL2Q12926 359 aaKnown RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 TRIM32Q13049 653 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 MTA1Q13330 715 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 PRPSAP1Q14558 356 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 TAF5Q15542 800 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 TIGD5Q53EQ6 642 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 NOMO2Q5JPE7 1267 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 RAB41Q5JT25 222 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 BRMS1LQ5PSV4 323 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ZNF618Q5T7W0 954 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 BTBD8Q5XKL5 378 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 TTC19Q6DKK2 380 aaPredicted RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 ITPRIPL1Q6GPH6 555 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CCSAPQ6IQ19 270 aaPredicted RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 TRNP1Q6NT89 227 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 NPNTQ6UXI9 565 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 LRRC8DQ7L1W4 858 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 BEND5Q7L4P6 421 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 FAM131BQ86XD5 332 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CCNJLQ8IV13 435 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 UNC45BQ8IWX7 931 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CACNA2D3Q8IZS8 1091 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 PLD5Q8N7P1 536 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 FBXO36Q8NEA4 188 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 PCDH19Q8TAB3 1148 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ZNF473Q8WTR7 871 aaKnown RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 CLEC4CQ8WTT0 213 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CPT1BQ92523 772 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 SEPT8Q92599 483 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CDKL2Q92772 493 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 PGAP3Q96FM1 320 aaPredicted RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 FUBP3Q96I24 572 aaKnown RBP eCLIP7.15□□□□□ -1.26
USP39-219ENST00000496047 CSPG4P5Q96PW8 444 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 XPO6Q96QU8 1125 aaKnown RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 KCTD15Q96SI1 283 aaPredicted RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 CYTH2Q99418 400 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 NPY6RQ99463 290 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 C11orf84Q9BUA3 381 aaPredicted RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 COL25A1Q9BXS0 654 aaPredicted RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 IQCGQ9H095 443 aaKnown RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.15□□□□□ -1.26
USP39-219ENST00000496047 CXCL16Q9H2A7 254 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 FBXO44Q9H4M3 255 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 WDCPQ9H6R7 721 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ELAC1Q9H777 363 aaKnown RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 CATSPERBQ9H7T0 1116 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 AGO3Q9H9G7 860 aaKnown RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 CSNK1G1Q9HCP0 422 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 AAASQ9NRG9 546 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ABCC13Q9NSE7 274 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 TRMT13Q9NUP7 481 aaKnown RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 RNF19AQ9NV58 838 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ETNK2Q9NVF9 386 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 HAUS2Q9NVX0 235 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 GPATCH2LQ9NWQ4 482 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 DDIT4Q9NX09 232 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 TMEM161AQ9NX61 479 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 RNF186Q9NXI6 227 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.15□□□□□ -1.26
USP39-219ENST00000496047 COX16Q9P0S2 106 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 NME7Q9Y5B8 376 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 GBF1Q92538 1859 aa7.15□□□□□ -1.27
USP39-219ENST00000496047 PLXNA4Q9HCM2 1894 aa7.15□□□□□ -1.27
USP39-219ENST00000496047 A0A0A0MRY4 1105 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 C5orf60A6NFR6 353 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 GOLGA8MH3BSY2 632 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 H7C4K7 107 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 FGF10O15520 208 aaPredicted RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 HCRTO43612 131 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 ATP2C2O75185 946 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 TADA2AO75478 443 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 GCATO75600 419 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 TRPA1O75762 1119 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 APRTP07741 180 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 SRGAP2BP0DMP2 458 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 SLC2A3P11169 496 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 SELPP16109 830 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 RBL1P28749 1068 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 GRIK1P39086 918 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 HELZP42694 1942 aaKnown RBP7.14□□□□□ -1.27
USP39-219ENST00000496047 BRCC3P46736 316 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 HCAR3P49019 387 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 GLUD2P49448 558 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 GDF10P55107 478 aa7.14□□□□□ -1.27
USP39-219ENST00000496047 ADCY1Q08828 1119 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms