RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 CHST12Q9NRB3 414 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 PAK5Q9P286 719 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 PSMC3IPQ9P2W1 217 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 FAM47DPA6NHR8 397 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 EEF2KO00418 725 aaKnown RBP10.72□□□□□ -0.69
SAMM50-206ENST00000494795 DCLK1O15075 740 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 SNX3O60493 162 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 ABCG1P45844 678 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 LHX1P48742 406 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 INTS6LQ5JSJ4 861 aaKnown RBP10.72□□□□□ -0.69
SAMM50-206ENST00000494795 CES4AQ5XG92 561 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 HEATR6Q6AI08 1181 aaKnown RBP10.72□□□□□ -0.69
SAMM50-206ENST00000494795 FAM171BQ6P995 826 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 LVRNQ6Q4G3 990 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 ADGRD1Q6QNK2 874 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 OTUD6BQ8N6M0 293 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 PNPLA1Q8N8W4 532 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 COLGALT1Q8NBJ5 622 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 SH3TC2Q8TF17 1288 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 TTC25Q96NG3 672 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 COLEC11Q9BWP8 271 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 ZC3H7BQ9UGR2 993 aaKnown RBP10.72□□□□□ -0.69
SAMM50-206ENST00000494795 CAPN7Q9Y6W3 813 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 SZT2Q5T011 3432 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 A6NNZ2 444 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 CHADO15335 359 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 ARL4AP40617 200 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 USP46P62068 366 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 OVGP1Q12889 678 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 ZBTB17Q13105 803 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 TUBB8Q3ZCM7 444 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 OVOS1Q6IE37 1185 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 CEP57Q86XR8 500 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 ZNF276Q8N554 614 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 USP33Q8TEY7 942 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 TFB1MQ8WVM0 346 aaKnown RBP10.72□□□□□ -0.69
SAMM50-206ENST00000494795 CCT6BQ92526 530 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 MECRQ9BV79 373 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 CREBZFQ9NS37 354 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 SRRDQ9UH36 339 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 CDH9Q9ULB4 789 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 TRIM33Q9UPN9 1127 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 PSAT1Q9Y617 370 aa10.72□□□□□ -0.69
SAMM50-206ENST00000494795 C2orf71A6NGG8 1288 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 KPNA6O60684 536 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 ZNF623O75123 536 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 LRIG2O94898 1065 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 TBX18O95935 607 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 MSH2P43246 934 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 OR1G1P47890 313 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 SLC8A3P57103 927 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 PTK7Q13308 1070 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 SLC39A12Q504Y0 691 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 ARTNQ5T4W7 220 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 SCN4BQ8IWT1 228 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 FRMD8P1Q9BZ68 369 aaPredicted RBP10.71□□□□□ -0.69
SAMM50-206ENST00000494795 STMN4Q9H169 189 aaPredicted RBP10.71□□□□□ -0.69
SAMM50-206ENST00000494795 CCDC134Q9H6E4 229 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 ABI2Q9NYB9 513 aaPredicted RBP10.71□□□□□ -0.69
SAMM50-206ENST00000494795 EYSQ5T1H1 3165 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 A0A1W2PQ45 241 aaPredicted RBP10.71□□□□□ -0.69
SAMM50-206ENST00000494795 A0A1W2PQY0 241 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 MGAT1P26572 445 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 ARPP19P56211 112 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 SEMA3BQ13214 749 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 TUSC3Q13454 348 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 MAP3K21Q5TCX8 1036 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 RSPO2Q6UXX9 243 aaPredicted RBP10.71□□□□□ -0.69
SAMM50-206ENST00000494795 ARHGEF18Q6ZSZ5 1173 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 ARCQ7LC44 396 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 TDRPQ86YL5 185 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 HACE1Q8IYU2 909 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 VPS52Q8N1B4 723 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 ATAD1Q8NBU5 361 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 CASP10Q92851 521 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 SMARCD1Q96GM5 515 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 FOXP3Q9BZS1 431 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 CRISPLD1Q9H336 500 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 OR12D3Q9UGF7 316 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 FBXW11Q9UKB1 542 aa10.71□□□□□ -0.69
SAMM50-206ENST00000494795 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.71□□□□□ -0.7
SAMM50-206ENST00000494795 C9IYK1 514 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 NBNO60934 754 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 GCATO75600 419 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 MOCS2O96007 188 aaPredicted RBP10.71□□□□□ -0.7
SAMM50-206ENST00000494795 OAS1P00973 400 aaKnown RBP10.71□□□□□ -0.7
SAMM50-206ENST00000494795 INHAP05111 366 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 CD68P34810 354 aaPredicted RBP10.71□□□□□ -0.7
SAMM50-206ENST00000494795 SLC5A3P53794 718 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 SH2D5Q6ZV89 423 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 TMCO2Q7Z6W1 182 aaPredicted RBP10.71□□□□□ -0.7
SAMM50-206ENST00000494795 SCD5Q86SK9 330 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 DQX1Q8TE96 717 aaKnown RBP10.71□□□□□ -0.7
SAMM50-206ENST00000494795 ARNTL2Q8WYA1 636 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 AZIN2Q96A70 460 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 OXNAD1Q96HP4 312 aaPredicted RBP10.71□□□□□ -0.7
SAMM50-206ENST00000494795 SMC6Q96SB8 1091 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 KLC2Q9H0B6 622 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 CSNK1G1Q9HCP0 422 aa10.71□□□□□ -0.7
SAMM50-206ENST00000494795 SLC27A5Q9Y2P5 690 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms