RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 IYDQ6PHW0 289 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 LRRC55Q6ZSA7 311 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 C10orf53Q8N6V4 93 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 REPS2Q8NFH8 660 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 ZCWPW1Q9H0M4 648 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 ELOVL6Q9H5J4 265 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 SAR1AQ9NR31 198 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 HACD1B0YJ81 288 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 PDE2AO00408 941 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-207ENST00000494090 TRDMT1O14717 391 aaKnown RBP19.6■□□□□ 0.73
COL27A1-207ENST00000494090 HOXB8P17481 243 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-207ENST00000494090 SLC34A1Q06495 639 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 MAD2L1Q13257 205 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-207ENST00000494090 NAB1Q13506 487 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 CPNE1Q99829 537 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 CHST7Q9NS84 486 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 NCF1BA6NI72 391 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-207ENST00000494090 SRRM3A6NNA2 597 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-207ENST00000494090 NCF1CA8MVU1 366 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-207ENST00000494090 APOC4-APOC2K7ER74 178 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 CBX4O00257 560 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 ACKR2O00590 384 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 ATP9AO75110 1047 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 BMP10O95393 424 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 APOC2P02655 101 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 NCF1P14598 390 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-207ENST00000494090 TBX4P57082 545 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 ATP6AP1LQ52LC2 224 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 ZNF544Q6NX49 715 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 OTOAQ7RTW8 1153 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 TERB1Q8NA31 727 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 ETNPPLQ8TBG4 499 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 CIPCQ9C0C6 399 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 RBM22Q9NW64 420 aaKnown RBP eCLIP19.6■□□□□ 0.735e-7■■■□□ 16.7
COL27A1-207ENST00000494090 NR5A2O00482 541 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 RAMP2O60895 175 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 FSBPO95073 299 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 ERVK-10P10266 1014 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 FKBP1CQ5VVH2 108 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 MREGQ8N565 214 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 MSL3Q8N5Y2 521 aaKnown RBP19.59■□□□□ 0.73
COL27A1-207ENST00000494090 ELOVL4Q9GZR5 314 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 RPS6KB2Q9UBS0 482 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 WDR27A2RRH5 827 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 PRR23AA6NEV1 266 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 TMEM114B3SHH9 223 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 ACADMP11310 421 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 KRT84Q9NSB2 600 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 GPRC5DQ9NZD1 345 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 PAIP2BQ9ULR5 123 aaKnown RBP19.59■□□□□ 0.73
COL27A1-207ENST00000494090 PDHXO00330 501 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 TRIM13O60858 407 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 PTPN3P26045 913 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 CD151P48509 253 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 MMRN1Q13201 1228 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 CCDC92Q53HC0 331 aaPredicted RBP19.59■□□□□ 0.73
COL27A1-207ENST00000494090 MFSD4BQ5TF39 518 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 WDR59Q6PJI9 974 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 VPS33AQ96AX1 596 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 MMADHCQ9H3L0 296 aaPredicted RBP19.59■□□□□ 0.73
COL27A1-207ENST00000494090 CYP39A1Q9NYL5 469 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 PNMA8BQ9ULN7 279 aaPredicted RBP19.59■□□□□ 0.73
COL27A1-207ENST00000494090 ANKRD63C9JTQ0 380 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 CCDC81Q6ZN84 652 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 ARMC7Q9H6L4 198 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 SETD4Q9NVD3 440 aa19.59■□□□□ 0.73
COL27A1-207ENST00000494090 CNTNAP2Q9UHC6 1331 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 CLPTM1O96005 669 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 CYP2A7P20853 494 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 UBE3AQ05086 875 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 AGKQ53H12 422 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 APOBEC3HQ6NTF7 200 aaKnown RBP19.58■□□□□ 0.73
COL27A1-207ENST00000494090 EPS8L1Q8TE68 723 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 MYLK2Q9H1R3 596 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 DMAP1Q9NPF5 467 aaPredicted RBP19.58■□□□□ 0.73
COL27A1-207ENST00000494090 SNTG2Q9NY99 539 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 VPS51Q9UID3 782 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 ANKRD6Q9Y2G4 727 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 CYP1A2P05177 515 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 CCDC159P0C7I6 412 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 SERPINB1P30740 379 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 CCDC142Q17RM4 750 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 PCYOX1Q9UHG3 505 aa19.58■□□□□ 0.73
COL27A1-207ENST00000494090 UMODL1Q5DID0 1318 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 CYP3A7-CYP3A51PA0A087WV96 503 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 HPGDP15428 266 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 CYP3A7P24462 503 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 NME5P56597 212 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 LY6KQ17RY6 165 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 ZBTB49Q6ZSB9 765 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 KCNMB4Q86W47 210 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 PPP1R10Q96QC0 940 aaKnown RBP19.58■□□□□ 0.72
COL27A1-207ENST00000494090 USE1Q9NZ43 259 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 NCANO14594 1321 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 RNF103O00237 685 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 YWHAZP63104 245 aaKnown RBP19.58■□□□□ 0.72
COL27A1-207ENST00000494090 DSG4Q86SJ6 1040 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 LRRC39Q96DD0 335 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 ACTR8Q9H981 624 aa19.58■□□□□ 0.72
COL27A1-207ENST00000494090 STARD13Q9Y3M8 1113 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms