RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 HFE2Q6ZVN8 426 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 BNIPLQ7Z465 357 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 PSTKQ8IV42 348 aaKnown RBP14.22□□□□□ -0.13
VCP-207ENST00000493886 CCDC33Q8N5R6 958 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 SPDYE1Q8NFV5 336 aaPredicted RBP14.22□□□□□ -0.13
VCP-207ENST00000493886 LRRC8CQ8TDW0 803 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 PCED1BQ96HM7 432 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 SLC2A13Q96QE2 648 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 SMOQ99835 787 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 DHRS4Q9BTZ2 278 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 ARHGEF3Q9NR81 526 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 DTLQ9NZJ0 730 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 COX16Q9P0S2 106 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 MFHAS1Q9Y4C4 1052 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 M0QYT0 321 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 PRPF4O43172 522 aaKnown RBP eCLIP14.21□□□□□ -0.133e-7■□□□□ 8.1
VCP-207ENST00000493886 AVILO75366 819 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 TOMM70O94826 608 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 KRT4P19013 534 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 SPARCL1Q14515 664 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 UPP1Q16831 310 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 SYPL2Q5VXT5 272 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 ADGRD1Q6QNK2 874 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 RNF169Q8NCN4 708 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 UTP4Q969X6 686 aaKnown RBP14.21□□□□□ -0.13
VCP-207ENST00000493886 QKIQ96PU8 341 aaKnown RBP eCLIP14.21□□□□□ -0.13
VCP-207ENST00000493886 FRMD8Q9BZ67 464 aaPredicted RBP14.21□□□□□ -0.13
VCP-207ENST00000493886 ULBP1Q9BZM6 244 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 POPDC2Q9HBU9 364 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 RCOR3Q9P2K3 495 aaPredicted RBP14.21□□□□□ -0.13
VCP-207ENST00000493886 DCTN4Q9UJW0 460 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 C15orf41Q9Y2V0 281 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 KBTBD13C9JR72 458 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 NRP1O14786 923 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 ZNF623O75123 536 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 GCATO75600 419 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 FBXO21O94952 628 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 UNC5CO95185 931 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 APRTP07741 180 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 CCND3P30281 292 aaPredicted RBP14.21□□□□□ -0.13
VCP-207ENST00000493886 MAGEA6P43360 314 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 CBLBQ13191 982 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 TIGD5Q53EQ6 642 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 LVRNQ6Q4G3 990 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 C4orf22Q6V702 233 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 ASRGL1Q7L266 308 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 NPHS2Q9NP85 383 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 TMPRSS4Q9NRS4 437 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 CDH9Q9ULB4 789 aa14.21□□□□□ -0.13
VCP-207ENST00000493886 SMG5Q9UPR3 1016 aaKnown RBP14.21□□□□□ -0.13
VCP-207ENST00000493886 ZSCAN9O15535 394 aaPredicted RBP14.21□□□□□ -0.14
VCP-207ENST00000493886 ADRA1DP25100 572 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 SLC18A1P54219 525 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 NME3Q13232 169 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 TLDC1Q6P9B6 456 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 AGGF1Q8N302 714 aaeCLIP14.21□□□□□ -0.14
VCP-207ENST00000493886 KLHDC9Q8NEP7 349 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 ZMIZ2Q8NF64 920 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 LRRC37BQ96QE4 947 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 KCNK16Q96T55 309 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 CYTH2Q99418 400 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 ARHGEF4Q9NR80 690 aa14.21□□□□□ -0.14
VCP-207ENST00000493886 H0Y3Z8 333 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 IMPDH2P12268 514 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 DAOAP59103 153 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 YWHAGP61981 247 aaKnown RBP eCLIP14.2□□□□□ -0.14
VCP-207ENST00000493886 DEUP1Q05D60 604 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 RIPK1Q13546 671 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 RNF43Q68DV7 783 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 HEATR6Q6AI08 1181 aaKnown RBP14.2□□□□□ -0.14
VCP-207ENST00000493886 GPRIN1Q7Z2K8 1008 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 CAND1Q86VP6 1230 aaKnown RBP14.2□□□□□ -0.14
VCP-207ENST00000493886 VPS52Q8N1B4 723 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 DENND1AQ8TEH3 1009 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 RNF139Q8WU17 664 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 DCAKDQ8WVC6 231 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 TMEM30AQ9NV96 361 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 NOP53Q9NZM5 478 aaKnown RBP14.2□□□□□ -0.14
VCP-207ENST00000493886 PTCH2Q9Y6C5 1203 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 TCRBV9S1A1TA0A576 114 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 SPAG6O75602 509 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 METTL18O95568 372 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 POMCP01189 267 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 FYNP06241 537 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 PCSK1P29120 753 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 CA8P35219 290 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 CACNA2D1P54289 1103 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 DSC3Q14574 896 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 CCSAPQ6IQ19 270 aaPredicted RBP14.2□□□□□ -0.14
VCP-207ENST00000493886 TFB1MQ8WVM0 346 aaKnown RBP14.2□□□□□ -0.14
VCP-207ENST00000493886 RSRC1Q96IZ7 334 aaKnown RBP14.2□□□□□ -0.14
VCP-207ENST00000493886 OLFM3Q96PB7 478 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 EBF2Q9HAK2 575 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 CNGB3Q9NQW8 809 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 PIGVQ9NUD9 493 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 CENPFP49454 3210 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 DNAH12Q6ZR08 3092 aa14.2□□□□□ -0.14
VCP-207ENST00000493886 YJEFN3A6XGL0 299 aa14.19□□□□□ -0.14
VCP-207ENST00000493886 E7ENQ6 273 aa14.19□□□□□ -0.14
VCP-207ENST00000493886 H3BRJ5 948 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms