RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 RPN2P04844 631 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 EIF4BP23588 611 aaKnown RBP16.69■□□□□ 0.26
BRAT1-206ENST00000493232 RANBP1P43487 201 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 SLC6A3Q01959 620 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 USP39Q53GS9 565 aaKnown RBP16.69■□□□□ 0.26
BRAT1-206ENST00000493232 CBWD3Q5JTY5 395 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 CBWD5Q5RIA9 395 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 CYB5D1Q6P9G0 228 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 MAP4K3Q8IVH8 894 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 FAM136AQ96C01 138 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 REPS1Q96D71 796 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 DPY30Q9C005 99 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 TAS2R13Q9NYV9 303 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 PSMD12O00232 456 aaPredicted RBP16.69■□□□□ 0.26
BRAT1-206ENST00000493232 TRIM66O15016 1216 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 OR56A5P0C7T3 313 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 ADORA2AP29274 412 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 SGCGQ13326 291 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 IQSEC1Q6DN90 963 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 CYP4Z2PQ8N1L4 340 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 NLNQ9BYT8 704 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 UBP1Q9NZI7 540 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 E9PBE3 544 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 KLHL41O60662 606 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 HMGCRP04035 888 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 NME5P56597 212 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 BMPR2Q13873 1038 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 PNMA5Q96PV4 448 aa16.69■□□□□ 0.26
BRAT1-206ENST00000493232 KCTD14Q9BQ13 255 aaPredicted RBP16.69■□□□□ 0.26
BRAT1-206ENST00000493232 TIMM13Q9Y5L4 95 aaPredicted RBP16.69■□□□□ 0.26
BRAT1-206ENST00000493232 DCCP43146 1447 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 STAU1O95793 577 aaKnown RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 RAG1P15918 1043 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 KLRC2P26717 231 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 FBXO39Q8N4B4 442 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 ZNF513Q8N8E2 541 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 IL17RBQ9NRM6 502 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 MEGF6O75095 1541 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 FAM86B1E9PN63 330 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 CCNT2O60583 730 aaKnown RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 VPS4BO75351 444 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 CYP3A4P08684 503 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 FAM86B2P0C5J1 330 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 SLC2A4P14672 509 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 ATP6V1B2P21281 511 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 AKAP5P24588 427 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 CCT8P50990 548 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 AGKQ53H12 422 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 PANX3Q96QZ0 392 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 DCLRE1BQ9H816 532 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 TCF7L2Q9NQB0 619 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 LACTBL1A8MY62 500 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 CYP1A1P04798 512 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 GHRP10912 638 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 ATP6V1B1P15313 513 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 ACAT1P24752 427 aaKnown RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 PIK3CGP48736 1102 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 ARHGEF19Q8IW93 802 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 GPC2Q8N158 579 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 FAM163AQ96GL9 167 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 C10orf88Q9H8K7 445 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 ZNF839A8K0R7 811 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 CNOT3O75175 753 aaKnown RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 PTPN4P29074 926 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 ELK3P41970 407 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 RXRGP48443 463 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 N4BP2L1Q5TBK1 243 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 ARHGAP17Q68EM7 881 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 DEFB132Q7Z7B7 95 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 SLC35C1Q96A29 364 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 L1RE1Q9UN81 338 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 NAALADL1Q9UQQ1 740 aa16.68■□□□□ 0.26
BRAT1-206ENST00000493232 CEP170BQ9Y4F5 1589 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-206ENST00000493232 TRMT11Q7Z4G4 463 aaKnown RBP16.67■□□□□ 0.26
BRAT1-206ENST00000493232 MTDHQ86UE4 582 aaKnown RBP16.67■□□□□ 0.26
BRAT1-206ENST00000493232 CDK20Q8IZL9 346 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 MCOLN3Q8TDD5 553 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 ASB2Q96Q27 587 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 TBL1YQ9BQ87 522 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 ZW10O43264 779 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 RIPK2O43353 540 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 CSDE1O75534 798 aaKnown RBP16.67■□□□□ 0.26
BRAT1-206ENST00000493232 BAIAP3O94812 1187 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 ATP5BP06576 529 aaKnown RBP16.67■□□□□ 0.26
BRAT1-206ENST00000493232 KYQ8NBH2 561 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 OR56A4Q8NGH8 313 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 FAM153AQ9UHL3 310 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 FAM220BPB1ANY3 271 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 TRIM13O60858 407 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 TRMT5Q32P41 509 aaKnown RBP16.67■□□□□ 0.26
BRAT1-206ENST00000493232 SCARA3Q6AZY7 606 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 TFAP2DQ7Z6R9 452 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 DEFB106AQ8N104 65 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 MIER2Q8N344 545 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 LENG9Q96B70 501 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 APOPT1Q96IL0 206 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 SERAC1Q96JX3 654 aa16.67■□□□□ 0.26
BRAT1-206ENST00000493232 P2RX7Q99572 595 aaKnown RBP16.67■□□□□ 0.26
BRAT1-206ENST00000493232 POPDC2Q9HBU9 364 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms