RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 FAM149B1Q96BN6 582 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 ZNF419Q96HQ0 510 aaPredicted RBP11.94□□□□□ -0.5
LRTM1-202ENST00000493075 FCRL2Q96LA5 508 aaPredicted RBP11.94□□□□□ -0.5
LRTM1-202ENST00000493075 NOX5Q96PH1 765 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 LSM14BQ9BX40 385 aaKnown RBP11.94□□□□□ -0.5
LRTM1-202ENST00000493075 CIPCQ9C0C6 399 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 PRDM16Q9HAZ2 1276 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 ACP6Q9NPH0 428 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 ASNSD1Q9NWL6 643 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 PILRBQ9UKJ0 227 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 PLA2G4CQ9UP65 541 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 DNAH14Q0VDD8 3507 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 KIAA1549LQ6ZVL6 1849 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 GOLGA6L7A0A1B0GV03 622 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 LNP1A1A4G5 178 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 IGLV3-25P01717 112 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 ATP5BP06576 529 aaKnown RBP11.93□□□□□ -0.5
LRTM1-202ENST00000493075 PABPC1P11940 636 aaKnown RBP11.93□□□□□ -0.5
LRTM1-202ENST00000493075 EEF1GP26641 437 aaKnown RBP11.93□□□□□ -0.5
LRTM1-202ENST00000493075 OXTRP30559 389 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 SLC6A4P31645 630 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 CLCN1P35523 988 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 KRT9P35527 623 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 IRX4P78413 519 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 ARID5AQ03989 594 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 LMAN2Q12907 356 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 PPM1JQ5JR12 505 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 DAB2IPQ5VWQ8 1189 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 NADSYN1Q6IA69 706 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 RFWD3Q6PCD5 774 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 SLC23A3Q6PIS1 610 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 CHST9Q7L1S5 443 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 RABEPKQ7Z6M1 372 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 TMPRSS6Q8IU80 811 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 FAM71AQ8IYT1 594 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 HJURPQ8NCD3 748 aaPredicted RBP11.93□□□□□ -0.5
LRTM1-202ENST00000493075 FIBINQ8TAL6 211 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 PPP1R13BQ96KQ4 1090 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 LMLNQ96KR4 655 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 EDEM2Q9BV94 578 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 NUSAP1Q9BXS6 441 aaKnown RBP11.93□□□□□ -0.5
LRTM1-202ENST00000493075 MKRN2Q9H000 416 aaKnown RBP11.93□□□□□ -0.5
LRTM1-202ENST00000493075 TMEM245Q9H330 911 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 TMEM74BQ9NUR3 256 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 ABCB8Q9NUT2 735 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.93□□□□□ -0.5
LRTM1-202ENST00000493075 USP36Q9P275 1121 aaKnown RBP11.93□□□□□ -0.5
LRTM1-202ENST00000493075 GGA2Q9UJY4 613 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 CEP250Q9BV73 2442 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 CACNA1AO00555 2505 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 ATG2BQ96BY7 2078 aa11.93□□□□□ -0.5
LRTM1-202ENST00000493075 TYW5A2RUC4 315 aaKnown RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 PATE3B3GLJ2 98 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 TBL1XO60907 577 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 TRUB2O95900 331 aaKnown RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 IGLV3-19P01714 112 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 ADRB1P08588 477 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 DLDP09622 509 aaKnown RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SLC2A3P11169 496 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 ITPKAP23677 461 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 CD6P30203 668 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SGSHP51688 502 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 COPAP53621 1224 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 CDK17Q00537 523 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 ZNF33AQ06730 810 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 KCNMA1Q12791 1236 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 MTA1Q13330 715 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 CAMK2GQ13555 558 aaPredicted RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 DUOXA1Q1HG43 343 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 TRIM61Q5EBN2 209 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 TCP11X2Q5H9J9 407 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 MS4A13Q5J8X5 152 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 KLHDC7AQ5VTJ3 777 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 MBLAC2Q68D91 279 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 KIAA1324Q6UXG2 1013 aaKnown RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SERPINA13PQ6UXR4 307 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 C11orf57Q6ZUT1 292 aaPredicted RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 TAC4Q86UU9 113 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 ZDHHC17Q8IUH5 632 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 CADM4Q8NFZ8 388 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 ENOX1Q8TC92 643 aaKnown RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SORCS1Q8WY21 1168 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 PRCCQ92733 491 aaPredicted RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 FOXJ1Q92949 421 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 TTC17Q96AE7 1141 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SIPA1Q96FS4 1042 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 BTN2A3PQ96KV6 586 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SLC2A13Q96QE2 648 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 CPXM1Q96SM3 734 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 FBRSQ9HAH7 460 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 TMEM9BQ9NQ34 198 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SAMSN1Q9NSI8 373 aaKnown RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 WSB2Q9NYS7 404 aaPredicted RBP11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SUN2Q9UH99 717 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SLC12A6Q9UHW9 1150 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 SLC6A14Q9UN76 642 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 CYP8B1Q9UNU6 501 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 NFE2L3Q9Y4A8 694 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 MYH10P35580 1976 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 MYOFQ9NZM1 2061 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms