RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 CISD3P0C7P0 127 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 GZMAP12544 262 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 TDGF1P13385 188 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 SULT1E1P49888 294 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 NRLP54845 237 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 DEUP1Q05D60 604 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 E2F5Q15329 346 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 HSF5Q4G112 596 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-215ENST00000492451 FAM133BQ5BKY9 247 aaKnown RBP14.33□□□□□ -0.12
PTPN7-215ENST00000492451 BRMS1LQ5PSV4 323 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 PIK3R6Q5UE93 754 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 E4F1Q66K89 784 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-215ENST00000492451 SARM1Q6SZW1 724 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 MON1BQ7L1V2 547 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 ZNF571Q7Z3V5 609 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-215ENST00000492451 VPS36Q86VN1 386 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 ZNF557Q8N988 423 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-215ENST00000492451 RPLP0P6Q8NHW5 317 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 NELL1Q92832 810 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 SELENOOQ9BVL4 669 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 METTL5Q9NRN9 209 aaKnown RBP14.33□□□□□ -0.12
PTPN7-215ENST00000492451 PLK2Q9NYY3 685 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 COX16Q9P0S2 106 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 GPR179Q6PRD1 2367 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 GVINP1Q7Z2Y8 2422 aa14.33□□□□□ -0.12
PTPN7-215ENST00000492451 GOLGA6L7A0A1B0GV03 622 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 KRT3P12035 628 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 CASP14P31944 242 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 FLT3P36888 993 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 CXCR3P49682 368 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 SEC13P55735 322 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 C2orf27AQ580R0 203 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 TDRD12Q587J7 1177 aaKnown RBP14.32□□□□□ -0.12
PTPN7-215ENST00000492451 C10orf76Q5T2E6 689 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 ACBD5Q5T8D3 534 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-215ENST00000492451 NADSYN1Q6IA69 706 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 RFWD3Q6PCD5 774 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 ZC3H14Q6PJT7 736 aaKnown RBP14.32□□□□□ -0.12
PTPN7-215ENST00000492451 SYT13Q7L8C5 426 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 TRMT11Q7Z4G4 463 aaKnown RBP14.32□□□□□ -0.12
PTPN7-215ENST00000492451 VSTM4Q8IW00 320 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 CCDC117Q8IWD4 279 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-215ENST00000492451 DRC7Q8IY82 874 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 MCOLN2Q8IZK6 566 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 HJURPQ8NCD3 748 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-215ENST00000492451 C3orf20Q8ND61 904 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 USP33Q8TEY7 942 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 WDCPQ9H6R7 721 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 SLC8A2Q9UPR5 921 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 STARD13Q9Y3M8 1113 aa14.32□□□□□ -0.12
PTPN7-215ENST00000492451 PTPRZ1P23471 2315 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-215ENST00000492451 SIGLEC16A6NMB1 481 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 TBL1XO60907 577 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 SKILP12757 684 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 PDGFRAP16234 1089 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 HOXD9P28356 352 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-215ENST00000492451 HOXA6P31267 233 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 SDC4P31431 198 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 SLC6A4P31645 630 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 RDXP35241 583 aaKnown RBP14.31□□□□□ -0.12
PTPN7-215ENST00000492451 SATB1Q01826 763 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 MESP2Q0VG99 397 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 TSR1Q2NL82 804 aaKnown RBP14.31□□□□□ -0.12
PTPN7-215ENST00000492451 MS4A13Q5J8X5 152 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 DNAJC24Q6P3W2 148 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 CHSY1Q86X52 802 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 SUMF1Q8NBK3 374 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 RXFP2Q8WXD0 754 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 TRIM11Q96F44 468 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 TBCBQ99426 244 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 TRIM5Q9C035 493 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 PIGVQ9NUD9 493 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 FAM186AA6NE01 2351 aa14.31□□□□□ -0.12
PTPN7-215ENST00000492451 ATG2BQ96BY7 2078 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 ZNF292O60281 2723 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 C2CD4BA6NLJ0 364 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 TMCO5BA8MYB1 307 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 F5H5T6 163 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 DDX3XO00571 662 aaKnown RBP eCLIP14.3□□□□□ -0.121e-6■□□□□ 8.9
PTPN7-215ENST00000492451 TRIM24O15164 1050 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 TIMM44O43615 452 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 RTN2O75298 545 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 ENDOD1O94919 500 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 LMNAP02545 664 aaKnown RBP14.3□□□□□ -0.12
PTPN7-215ENST00000492451 DESP17661 470 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 TACR2P21452 398 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 HNRNPH3P31942 346 aaKnown RBP14.3□□□□□ -0.12
PTPN7-215ENST00000492451 TIE1P35590 1138 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 PTPN9P43378 593 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 KIR2DL1P43626 348 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-215ENST00000492451 DMWDQ09019 674 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 EIF4HQ15056 248 aaKnown RBP14.3□□□□□ -0.12
PTPN7-215ENST00000492451 EOGTQ5NDL2 527 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 RABGAP1LQ5R372 815 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 TTC39BQ5VTQ0 682 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-215ENST00000492451 OTUD1Q5VV17 481 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-215ENST00000492451 RAP1GAP2Q684P5 730 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 HGSNATQ68CP4 663 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 RNF43Q68DV7 783 aa14.3□□□□□ -0.12
PTPN7-215ENST00000492451 TRNP1Q6NT89 227 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms